FC875674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAP1B_HUMAN (Ras-related protein Rap-1b OS=Homo sapiens GN=RAP1B PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 +KLV++G GG GK+ + + G F ++Y+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++P++L GNK D+++ +V K Q + N + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAP1B_CHICK (Ras-related protein Rap-1b OS=Gallus gallus GN=RAP1B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 +KLV++G GG GK+ + + G F ++Y+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++P++L GNK D+++ +V K Q + N + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAP1B_BOVIN (Ras-related protein Rap-1b OS=Bos taurus GN=RAP1B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 +KLV++G GG GK+ + + G F ++Y+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++P++L GNK D+++ +V K Q + N + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 577 FK V+ GD G GKT+ + R F + + TIG+E + I+ WDTAG+++F + + +Y II++DVT + +++NVP+W D+ R EN+ ++ GNK D+ +++V + F ++ + EISAK + N E+ F+ L + Sbjct: 9 FKFVLAGDSGVGKTSILFRITDDTFTETHI-TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVK 165
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB4A_ECHMU (Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 47/162 (29.01%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKA---KQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 FK +I+G+ GTGKT ++R+ +F + TIG E + ++ WDTAGQE+F + YY ++++D+T R ++ V W D + + ++L GNK D+++ + + TF ++ LQ+ E SA + N + F R L Sbjct: 10 FKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDTAGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKDLRDTDGQVTHWEANTFAQENGLQFIETSALTGENIDDAFTSCVRVL 171
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 83 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 562 + Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ + + +++ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D++ +V K + ++E SAK N + + F Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAF 176
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 46/163 (28.22%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 107 SFKLVIVGDGGTGKTTFVKRHLTGEF-EKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 +FK+++VGD G GKT + R G F + T+G++ + K++ WDTAGQE+F + YY ++++D+T + ++ N+ W ++ +++ ++L GNKVD ++R VK + ++ L + E SA++ N + F +A++L Sbjct: 67 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKEL 229
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RHO3_YEAST (GTP-binding protein RHO3 OS=Saccharomyces cerevisiae GN=RHO3 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPT-WHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVT 490 K+VI+GDG GKT+ + G F + YEPT+ E + D F + I WDTAGQE+F LR Y QC ++ F + +R + +NV W ++ CE + +VL K D++N + ++ +T Sbjct: 18 KIVILGDGACGKTSLLNVFTRGYFPEVYEPTV-FENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAIT 143
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RB33A_MOUSE (Ras-related protein Rab-33A OS=Mus musculus GN=Rab33a PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 89 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAK-QVTFHRKKNLQYYEISA---KSNYNFEKPFLYLARKLAGDPNL 601 Q V FK++++GD GKT R G F + E TIGV+ KI+ WDTAGQE+F + + YY + + ++DVT ++ N+ W ++ C V +P VL GNK D++ + QV + + F N+ +E SA K + N E F+ LA +L +L Sbjct: 30 QYVQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE-CNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRLKAQKSL 208
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RB33A_HUMAN (Ras-related protein Rab-33A OS=Homo sapiens GN=RAB33A PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 89 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAK-QVTFHRKKNLQYYEISA---KSNYNFEKPFLYLARKLAGDPNL 601 Q V FK++++GD GKT R G F + E TIGV+ KI+ WDTAGQE+F + + YY + + ++DVT ++ N+ W ++ C V +P VL GNK D++ + QV + + F N+ +E SA K + N E F+ LA +L +L Sbjct: 30 QYVQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE-CNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRLKAQKSL 208 The following BLAST results are available for this feature:
BLAST of FC875674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875674 ID=FC875674; Name=FC875674; organism=Citrus clementina; type=EST; length=716bpback to top |