FC875674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RALA_HUMAN (Ras-related protein Ral-A OS=Homo sapiens GN=RALA PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 49/161 (30.43%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 583 K+++VG GG GK+ + + EF + YEPT + + + +++ DTAGQE + +RD Y+ G+ + +F +T ++ + + RV EN+P +L GNK D+++ RQV ++ ++ N+ Y E SAK+ N +K F L R++ Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 175
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 44/160 (27.50%), Postives = 86/160 (53.75%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 KL+++GD G GK+ + R G F + TIG++ +I+ WDTAGQE+F + YY ++++DVT ++ ++ W R++ +++ +L GNK D+ ++V ++ + + +++ E SAK++ N E+ F+ LA+ + Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDI 176
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 83 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 562 + Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ + + +++ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D++ +V K + ++E SAK N + + F Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAF 176
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 83 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 562 + Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ + + +++ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D++ +V K + ++E SAK N + + F Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAF 176
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 83 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 562 + Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ + + +++ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D++ +V K + ++E SAK N + + F Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAF 176
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 83 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 562 + Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ + + +++ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D++ +V K + ++E SAK N + + F Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAF 176
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB32_MOUSE (Ras-related protein Rab-32 OS=Mus musculus GN=Rab32 PE=2 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 58/199 (29.15%), Postives = 92/199 (46.23%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVE--VHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVK--NRQVKAKQVTFHRKKNLQ-YYEISAKSNYNFEKPFLYLARKLAGD-----------PNLHFVESPALAPPEVQ 643 FK++++G+ G GKT+ +KR++ F + Y TIGV+ + L++ + +R WD AGQE+FG + YY A ++FD++ T+ V W DL IP VL NK D K N Q ++ F + ++E SAK N N ++ +L + + + VE P P Q Sbjct: 24 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT-LVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLLANKCDQKKDNSQSPSQMDQFCKDHGFTGWFETSAKDNINIDEATRFLVENMLANQQSFPSEEIDLDRIKLVEEPPTTKPRSQ 221
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 47/163 (28.83%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 107 SFKLVIVGDGGTGKTTFVKRHLTGEF-EKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVD-VKNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 +FK+++VGD G GKT + R G F + T+G++ + K++ WDTAGQE+F + YY ++++DVT + ++ ++ W ++ +++ ++L GNKVD + R VK + + L + E SAK+ N + F +A++L Sbjct: 63 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPF 562 FK+V++GD GK+ + R+ EF + TIGVE +++ WDTAGQE+F + YY A++++D+T R T+++V W +L + +L GNK D++N R V ++ ++ L + E SA + N + F Sbjct: 13 FKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAF 166
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15 Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV-KNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLA 574 FKL+++GD GK+ F+ R + Y TIGV+ ++ WDTAGQE+F + YY II++D+T ++ NV W ++ R +++ +L GNK D+ +NR V + ++ + + E SAK + N E+ FL ++ Sbjct: 9 FKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMS 166 The following BLAST results are available for this feature:
BLAST of FC875674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875674 ID=FC875674; Name=FC875674; organism=Citrus clementina; type=EST; length=716bpback to top |