FC875674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 49/166 (29.52%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPT-WHRDLCRVCENIPIVLCGNKVDVKN--------RQVKAKQVT-------FHRKKNLQYYEISAKSNYNFEKPF 562 KLV++GDG GKT + + F + Y PT+ + + ++ I WDTAGQE++ LR Y + +I F +T ++++NV T W+ ++ C +P +L G K+D ++ +Q K +T R K ++Y E SAK++ N ++ F Sbjct: 8 KLVVIGDGAVGKTCLLISYANNRFPEDYIPTV-FDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTRDDRGVLDKLQQTGHKPITTEQGNDLARRIKAIKYMECSAKTSQNLKQVF 172
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB38_MOUSE (Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVH-PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD-----VKNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARK-LAGDPNLHFVESPALAPPEV 640 +KL+++GD G GKT+ +KR++ F Y TIGV+ + + +R WD AGQE+FG + YY A I+FDVT T++ V W DL + + +VL NK D + N +K Q F ++ + ++E SAK N N ++ L + LA + +L P + P + Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQ--FCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDLLESIEPDIVKPHL 197
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB38_HUMAN (Ras-related protein Rab-38 OS=Homo sapiens GN=RAB38 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVH-PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD-----VKNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARK-LAGDPNLHFVESPALAPPEV 640 +KL+++GD G GKT+ +KR++ F Y TIGV+ + + +R WD AGQE+FG + YY A I+FDVT T++ V W DL + + +VL NK D + N +K Q F ++ + ++E SAK N N ++ L + LA + +L P + P + Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQ--FCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDLMESIEPDVVKPHL 197
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB12_RAT (Ras-related protein Rab-12 (Fragment) OS=Rattus norvegicus GN=Rab12 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 46/153 (30.07%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 125 VGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-NRQVKAKQVTFHRKK--NLQYYEISAKSNYNFEKPFLYL 571 +G G GKT+ ++R F + + T+GV+ KIR WDTAGQE+F + YY + I+++D+T + T+ ++P W + + + E+ ++L GNK+D + +R++ +Q ++ ++ E SAK N+N ++ FL L Sbjct: 1 IGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLAGNKLDCETDREISRQQGEKFAQQITGMRLSEPSAKDNFNVDEIFLKL 153
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RECG_ENTHI (Rho-related protein racG OS=Entamoeba histolytica GN=RACG PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 487 KLVIVGDG GKT + + T F Y PT+ E + + KI WDTAGQE + LR Y ++ F V A +Y+NV W ++ + C N+PI+L G K+D+++ + K++ Sbjct: 5 KLVIVGDGAVGKTCMLISYTTNAFPNEYIPTV-FENYNSSLVVDDVKINLGLWDTAGQEDYDRLRPLSYPSTDVFLVCFSVIAPASYENVEGKWKPEIDQHCPNVPIILVGTKIDIRDDPEQVKRL 129
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 48/159 (30.19%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVH----------PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW--HRDLCRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYN 547 K + +GD G GKT+ + ++ G+F ++ T+G++ P +I WDTAGQE+F L ++ +++FD+T ++ NV W + CEN IVLCGNK D+++ R VK ++ K + Y+E SA + N Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTN 169
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 48/162 (29.63%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 +KLV+VGDGG GK+ + + F Y+PTI G + DTAGQE++ +R+ Y G+ ++++++T+R ++ + T+++ + RV + P+VL NK D++ +V +A+ + + Y E SAK N E+ F L R + Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 +KLV++G GG GK+ + + G F ++Y+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++PI+L GNK D+++ +V K Q + + + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: YPT10_YEAST (GTP-binding protein YPT10 OS=Saccharomyces cerevisiae GN=YPT10 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14 Identity = 48/156 (30.77%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 107 SFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIG-------VEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFE 553 + K+V++GD GKT+ V R +G+F ++ TIG +EV D T +I WDTAGQE++ L YY A+I+F++ + + TW +DL + +++ GNK D+ + + + L Y +SAK+ YNF+ Sbjct: 4 TIKVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTE-KRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQDRAQGTQVIIVGNKYDLVCEEHSGEVTIPAELQGLPYVAVSAKTGYNFD 158
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14 Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKN--------RQVKAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 562 KLVIVGDG GKT + G+F + Y PT+ E + D + ++ WDTAGQE + LR Y +I F + + +NV W ++ C+ +PI+L G KVD++N RQ + VT +++ YYE SAK+ Y + F Sbjct: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 The following BLAST results are available for this feature:
BLAST of FC875674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875674 ID=FC875674; Name=FC875674; organism=Citrus clementina; type=EST; length=716bpback to top |