FC875675

Overview
NameFC875675
Unique NameFC875675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_BUCBP (Pyruvate kinase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=pykA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.406e-25
Identity = 69/194 (35.57%), Postives = 107/194 (55.15%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--TSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +IR  R + + VI AT M+ESMI +P PTRAEV D+A AV +G+DAVMLS ETA GK+P++ +KVM  V +  E   +       +   F + + E  A  A   +N L   T+I+  T +G  +++ S       IFA ++  +  +  +LY+GV PI+   S +     +  + LL K+G ++ G  V + Q
Sbjct:  269 LIRRARQLNRVVITATQMMESMINNPMPTRAEVMDVANAVLDGSDAVMLSAETASGKYPIETIKVMSKVCMGAEKMPSINVSQHRIHDKF-HDIEEAIAMSAMYAANHLSGITAIITMTESGKTSLMTSRITSGLPIFALSSHIQTLKLTALYRGVTPIFFNSSKEGVSAANEVINLLVKRGFLEPGNLVIITQ 461          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYR_CANFA (Pyruvate kinase isozyme R (Fragment) OS=Canis familiaris GN=PKLR PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 76/205 (37.07%), Postives = 113/205 (55.12%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQA--FKNHMSEMFAYHATMMS--NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCP-IYME-----FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGR 593
            +I  C   GK V+ AT MLESMI  P PTRAE SD+A AV +GAD +MLSGETA GKFP++AVK+ H ++   EA +    +   L +A       +E+ A  AT+ +       +I+V T+TG  A LLS YRP   + A T   +  ++  L +GV P +Y E     ++DD +      +   + +G ++ G+ V ++   R
Sbjct:  301 MIGRCNLAGKPVVCATQMLESMITKPRPTRAETSDVANAVLDGADCIMLSGETAKGKFPVEAVKMQHRIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAI-ATVEAAFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVTRSAQAARQAHLCRGVFPLLYSEPPEAIWADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWR 504          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 74/216 (34.26%), Postives = 117/216 (54.17%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNL--GQAFKNHMSEMFAYHATMMS-NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNI 629
            +I  C   GK VI AT MLESMI  P PTRAE SD+A AV +GAD +MLSGETA G +PL+AV++ H ++   EA +    +   L  G +    + E  A  +   S   L  +++V T +G  A  ++ YRP   I A T   +  ++  LY+G+ P+  +      +++D +   + A+ + + +G  K G+ V +L +G +P   F +T  +
Sbjct:  313 MIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELVRGSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKHGDVVIVL-TGWRPGSGFTNTMRV 527          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_BUCAI (Pyruvate kinase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=pykA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 72/196 (36.73%), Postives = 108/196 (55.10%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--TSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +++IRT R + + VI AT M+ESMI +P PTRAEV D+A AV +G+DAVMLS ETA G++P + V  M  +    E   +       +   F + + E  A  A  ++N L   T+I+  T +G  A++ S       IFA +  K      SLY+GV PIY    ++  +  + A+ LL+K+G +  GE V + Q
Sbjct:  267 KKLIRTARQLNRIVITATQMMESMITNPLPTRAEVMDVANAVLDGSDAVMLSAETASGEYPAETVIKMAKICKGAEKVPSINVSRHRIHAKF-DDIEEAIAMSAMYVANHLKGITAIITMTESGKTALMTSRITSGLPIFALSKNKETLNLASLYRGVTPIYFNSKNNNFKAANEAIVLLRKRGFLCRGELVIITQ 461          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYR_HUMAN (Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PKLR PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.399e-25
Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQA--FKNHMSEMFAYHATMMS-NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCP-IYME-----FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGR 593
            +I  C   GK V+ AT MLESMI  P PTRAE SD+A AV +GAD +MLSGETA G FP++AVK+ H ++   EA +    +   L +A       +E+ A  A   +      +I+V T TG  A LLS YRP   + A T   +  +++ L +GV P +Y E     ++DD +      +   + +G ++ G+ V ++   R
Sbjct:  356 MIGRCNLAGKPVVCATQMLESMITKPRPTRAETSDVANAVLDGADCIMLSGETAKGNFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEAAFKCCAAAIIVLTTTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLCRGVFPLLYREPPEAIWADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWR 559          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 115.546 bits (288), Expect = 2.399e-25
Identity = 73/216 (33.80%), Postives = 116/216 (53.70%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNH---MSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNI 629
            II  C   GK VI AT MLESMI  P PTRAE SD+A AV +GAD +MLSGETA G +PL+AV++ H ++   EA +    +   L ++  +    M  M           L  +++V T +G  A  ++ YRP   I A T   +  ++  LY+G+ P+  +      +++D +   + A+ + + +G  K+G+ V +L +G +P   F +T  +
Sbjct:  313 IIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARSSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVL-TGWRPGSGFTNTMRV 527          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK1_SYNY3 (Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=pyk1 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.399e-25
Identity = 70/195 (35.90%), Postives = 113/195 (57.95%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTS-IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYM-EFSDDAEETFDNALGLLQKQGMVKEGEEVALL 581
            +EIIR C      VI AT ML+SMI +  PTRAE SD+A A+ +G DAVMLSGE+A G++P+K+V+++  ++  TE  +     PP      +N  +   +    ++   L    IV FT +GF ++L S+ RPS  + AFT  +++   L+L  G+ P  + E  D  E+    A  LL+ + MV++G+++ ++
Sbjct:  274 KEIIRRCNVRAIPVITATQMLDSMIQNSRPTRAEASDVANAILDGTDAVMLSGESAVGQYPVKSVQMLRKIAEETEVGLHLVNNPP-----IENTETHALSEALVVIDGILDLKYIVTFTTSGFTSLLASNQRPSVPVIAFTPSEKVYHSLNLVWGIIPFLINEEFDTFEDLIQQAEVLLRDRKMVEKGDQLLIM 463          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 3.133e-25
Identity = 72/216 (33.33%), Postives = 116/216 (53.70%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMS---NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNI 629
            +I  C   GK VI AT MLESMI  P PTRAE SD+A AV +GAD +MLSGETA G +PL+AV++ H ++   EA +    +   L +A       + A     +      L  +++V T +G  A  ++ YRP   I A T   +  ++  LY+G+ P+  +      +++D +   + A+ + + +G  K+G+ V +L +G +P   F +T  +
Sbjct:  313 MIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAVFHRLLFEELARASSQSTDPLEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDAVLDAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVL-TGWRPGSGFTNTMRV 527          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYR_MOUSE (Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pklr PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.092e-25
Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQA--FKNHMSEMFAYHATMMS-NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCP-IYME-----FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGR 593
            +I  C   GK V+ AT MLESMI    PTRAE SD+A AV +GAD +MLSGETA G FP++AVK+ H ++   EA +    +   L +A       +E+ A  A   S      +I+V T+TG  A LLS YRP   + A T   +  +++ L +GV P +Y E     ++DD +      +   + +G ++ G+ V ++   R
Sbjct:  356 MIGRCNLAGKPVVCATQMLESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLSRGVFPLLYREPPEAVWADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWR 559          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK2_SALTY (Pyruvate kinase II OS=Salmonella typhimurium GN=pykA PE=3 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 4.092e-25
Identity = 72/194 (37.11%), Postives = 104/194 (53.61%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--TSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +IR  R + +AVI AT M+ESMI +P PTRAEV D+A AV +G DAVMLS ETA G++P + V  M  V L  E   +       L   F N + E  A  A   +N L   T+I+  T +G  A++ S       IFA +  +R     +LY+GV P++ + + D       A+ LL+ +G +  G+ V + Q
Sbjct:  269 LIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN-VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSAADGVVAAHEAVNLLRDKGYLVSGDLVIVTQ 461          
The following BLAST results are available for this feature:
BLAST of FC875675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK_BUCBP1.406e-2535.57Pyruvate kinase OS=Buchnera aphidicola subsp. Baiz... [more]
KPYR_CANFA1.837e-2537.07Pyruvate kinase isozyme R (Fragment) OS=Canis fami... [more]
KPYM_FELCA1.837e-2534.26Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]
KPYK_BUCAI1.837e-2536.73Pyruvate kinase OS=Buchnera aphidicola subsp. Acyr... [more]
KPYR_HUMAN2.399e-2536.27Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PK... [more]
KPYM_RABIT2.399e-2533.80Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK1_SYNY32.399e-2535.90Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC... [more]
KPYM_RAT3.133e-2533.33Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYR_MOUSE4.092e-2536.27Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pk... [more]
KPYK2_SALTY4.092e-2537.11Pyruvate kinase II OS=Salmonella typhimurium GN=py... [more]

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Properties
Property NameValue
Genbank descriptionC31401E12EF CTVClemen1 Citrus clementina cDNA clone C31401E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875675 ID=FC875675; Name=FC875675; organism=Citrus clementina; type=EST; length=658bp
AGGAAGAGATAATAAGGACTTGTCGTAGCATGGGGAAAGCTGTTATTGTG
GCCACCAATATGTTGGAAAGCATGATTGTTCATCCAACTCCAACCAGAGC
AGAGGTCTCAGACATTGCCATTGCTGTCCGAGAGGGTGCTGACGCCGTCA
TGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCATTGAAAGCCGTGAAA
GTAATGCACACTGTCTCATTACGGACTGAAGCAACCATAACAGGTGGTGC
AATGCCACCAAATCTTGGTCAAGCTTTCAAGAACCACATGAGCGAGATGT
TTGCATACCATGCGACCATGATGTCCAACACGCTTGGAACTTCCATCGTT
GTCTTCACTAGAACTGGTTTTATGGCTATATTACTGAGCCATTATCGACC
TTCTGGCACTATATTTGCCTTCACAAATGAGAAGAGGATTCAGCAAAGGC
TGTCTTTGTATCAAGGAGTTTGCCCCATCTACATGGAGTTCTCAGACGAT
GCTGAAGAAACCTTTGACAATGCCTTAGGTTTATTGCAGAAACAAGGAAT
GGTAAAGGAAGGAGAAGAGGTAGCACTTCTTCAGAGTGGCAGACAACCCA
TCTGGCGGTTCCAATCCACTCACAATATTCAGGTCCGNCAAGTGTAGACA
CAGAGCGG
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