FC875675

Overview
NameFC875675
Unique NameFC875675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10993 contig Ccv1_Contig10993:288..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_CLOAB (Pyruvate kinase OS=Clostridium acetobutylicum GN=pyk PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.344e-25
Identity = 65/191 (34.03%), Postives = 107/191 (56.02%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT-GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            II+ C ++GK VI AT ML+SM+ +P PTRAE SDIA A+ +G DA+MLSGE+A+G +P++AV  M  ++   E  I     +    G   KN    +     T  ++   ++I+  T+TG  A  +S YRP   + A T  +++ ++L++  GV PI  +     +E    ++    + G V++G+ V +
Sbjct:  262 IIKKCNAVGKPVITATQMLDSMMRNPRPTRAEASDIANAIFDGTDAIMLSGESANGSYPIEAVTTMAKIAQEAENEINYDKFLAERKGNEKKNTSDVISLGTCTAAADLEASAIITATQTGSTARTVSKYRPKAPVIAVTPSEKVARKLAMSWGVHPIISDKFGSTDELISTSVDKALEAGYVQKGDLVVV 452          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.344e-25
Identity = 67/196 (34.18%), Postives = 108/196 (55.10%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG----GAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            +E+I+ C ++GK VI AT ML+SM  +P PTRAE SD+A A+ +G DA+MLSGETA G +P++AV+ MH ++ R+E  +       A    +  +  + + +  A+ A    N    +IV  T +G  A ++S YRP   I A T    + ++LSL  GV     +     +E  + A+      G+V+ G+ + +
Sbjct:  261 KELIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGNYPVEAVQTMHNIASRSEEALNHKKILSARSKQVSMSITDAIGQSVAHTAI---NLDVNAIVTPTESGHTARMISKYRPQAPIVAVTVNDAVSRKLSLVFGVFATSGQNHSSTDEMLEKAVQKSLDTGIVRHGDLIVI 453          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK2_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.344e-25
Identity = 73/218 (33.49%), Postives = 124/218 (56.88%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEA----TITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            +EIIR CR   K VIVAT ML+SM+  PTPTRAE SD+A A+ +GADAVMLS ETA G +P++AV++M+ +  +TE          A  P++ Q+  + ++   A  A  + + +   +V +T +G  A  +S  RP+  I A T  +++ +RL+++ GV  +  +     E +  +A   +Q+  +    + + ++     P  +  ST+N++V Q+
Sbjct:  261 KEIIRACRLAAKPVIVATQMLDSMVSSPTPTRAEASDVAGAIYDGADAVMLSAETATGAYPVEAVEIMNRIIEKTEKHKHYRPILEATEPDVAQSPPHAVATAAANVAVALGSPV---VVAYTSSGTTAARISRARPALPILALTPSEQVARRLNMFWGVVGVRSQDVHTYEASLIHAQQAVQEAKLASPSDHIVIVAG--FPFAQQGSTNNLRVVQI 473          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/204 (33.82%), Postives = 105/204 (51.47%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTS------------IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            +++IR C  +GK VI AT ML+SM  +P  TRAE SD+A A+ +G DAVMLSGETA G +P +AVK M  +++  EA            Q +K  +S+      T + N +G S            IV  T +G  A+ +S YRP   I A T  +   ++L+L  G  P+  +     ++  +NA+    + G V  G+ + +
Sbjct:  261 KDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEA-----------AQDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTAVTISKYRPHSDIIAVTPSEHTARQLALVWGAYPVIKKGRKTTDDLLNNAVATAVETGRVTNGDLIII 453          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 9.116e-25
Identity = 70/204 (34.31%), Postives = 108/204 (52.94%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMS---NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGR 593
            +I  C   GK +I AT MLESMI  P PTRAE SD+A AV +GAD +MLSGETA G +PL+AV++ H ++   EA +        + +   +H     A  A  +      L  +++V T +G  A L+S YRP   I A T   +  ++  LY+GV P+  +      +++D +   +  + + + +G  K G+ V +L   R
Sbjct:  312 MIGRCNRAGKPIICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHAIAREAEAAMFHRQQFEEILRHSVHHREPADAMAAGAVEASFKCLAAALIVMTESGRSAHLVSRYRPRAPIIAVTRNDQTARQAHLYRGVFPVLCKQPAHDAWAEDVDLRVNLGMNVGKARGFFKTGDLVIVLTGWR 515          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_BUCAP (Pyruvate kinase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=pykA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.191e-24
Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--TSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +++IRT R + K  I AT M+ESMI++P PTRAEV D+A AV +G+DAVMLS ETA GK+P + V  M  V    E   +       L   F++ + E  A  +   +N L   T+I+  T +G  A++ S       IFA +  K+     +LY+GV PIY +   D  E  + A+ LL K+  +   + V + Q
Sbjct:  267 KKLIRTARKLNKVAITATQMMESMILNPLPTRAEVMDVANAVLDGSDAVMLSAETASGKYPSETVISMAKVCKGAEKVPSINVSRHRLNVEFQS-IEEAIAMSSMYAANHLKGITAIITMTESGKTALMTSRITSGLPIFALSKHKKTLNLTALYRGVIPIYFDSDKDGVEAANEAIILLCKKKFLFNNDLVIVTQ 461          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.555e-24
Identity = 69/204 (33.82%), Postives = 105/204 (51.47%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTS------------IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            +++IR C  +GK VI AT ML+SM  +P  TRAE SD+A A+ +G DAVMLSGETA G++P +AVK M  +++  EA            Q +K  +S+      T + N +G S            IV  T +G  A  +S YRP   I A T  ++  ++ ++  GV P+  E     +   +NA+    + G V  G+ + +
Sbjct:  260 KDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAVSAEA-----------AQDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEKTARQCAIVWGVNPVVKEGRKTTDALLNNAVATAVETGRVSNGDLIII 452          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.555e-24
Identity = 69/204 (33.82%), Postives = 105/204 (51.47%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTS------------IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            +++IR C  +GK VI AT ML+SM  +P  TRAE SD+A A+ +G DAVMLSGETA G++P +AVK M  +++  EA            Q +K  +S+      T + N +G S            IV  T +G  A  +S YRP   I A T  ++  ++ ++  GV P+  E     +   +NA+    + G V  G+ + +
Sbjct:  260 KDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAVSAEA-----------AQDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEKTARQCAIVWGVNPVVKEGRKTTDALLNNAVATAVETGRVSNGDLIII 452          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.031e-24
Identity = 73/204 (35.78%), Postives = 109/204 (53.43%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQA--FKNHMSEMFAYHATMMS-NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCP-IYME-----FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGR 593
            +I  C   GK V+ AT MLESMI    PTRAE SD+A AV +GAD +MLSGETA G FP++AV + H ++   EA +    +   L +A       +E+ A  A   S      +I+V T+TG  A LLS YRP   + A T   +  +++ L +GV P +Y E     ++DD +      +   + +G ++ G+ V ++   R
Sbjct:  356 MIGRCNLAGKPVVCATQMLESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAVMMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSQYRPRAAVIAVTRSAQAARQVHLSRGVFPLLYREPPEAIWADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWR 559          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_SACKL (Pyruvate kinase OS=Saccharomyces kluyveri GN=PYK1 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.031e-24
Identity = 73/203 (35.96%), Postives = 104/203 (51.23%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL---GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIY------MEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +++I  C   GK VI AT MLESM  +P PTRAEVSD+  AV +GAD VMLSGETA G +P+ AV +M   +L  E  I   A   +L        S      A  +S+       +I+V + TG    L+S Y+P+  I   T   R  +   LY+GV P         E++ D E   +  +   ++ GM+KEG+ +  +Q
Sbjct:  282 KKLIAKCNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAVLDGADCVMLSGETAKGNYPINAVTIMAETALIAEQAIPYVATYDDLRNFTPKPTSTTETIAAAAVSSVFEQKAKAIIVLSTTGDTPRLVSKYKPNVPIVMVTRNPRAARFSHLYRGVFPFVYESDTESEWTKDVESRLNFGIAKAKEFGMLKEGDTIVTIQ 484          
The following BLAST results are available for this feature:
BLAST of FC875675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK_CLOAB5.344e-2534.03Pyruvate kinase OS=Clostridium acetobutylicum GN=p... [more]
KPYK_BACLI5.344e-2534.18Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK2_AGRVI5.344e-2533.49Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_STAHJ6.980e-2533.82Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYK_CHICK9.116e-2534.31Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYK_BUCAP1.191e-2436.73Pyruvate kinase OS=Buchnera aphidicola subsp. Schi... [more]
KPYK_STAES1.555e-2433.82Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ1.555e-2433.82Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYR_RAT2.031e-2435.78Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYK_SACKL2.031e-2435.96Pyruvate kinase OS=Saccharomyces kluyveri GN=PYK1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31401E12EF CTVClemen1 Citrus clementina cDNA clone C31401E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875675 ID=FC875675; Name=FC875675; organism=Citrus clementina; type=EST; length=658bp
AGGAAGAGATAATAAGGACTTGTCGTAGCATGGGGAAAGCTGTTATTGTG
GCCACCAATATGTTGGAAAGCATGATTGTTCATCCAACTCCAACCAGAGC
AGAGGTCTCAGACATTGCCATTGCTGTCCGAGAGGGTGCTGACGCCGTCA
TGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCATTGAAAGCCGTGAAA
GTAATGCACACTGTCTCATTACGGACTGAAGCAACCATAACAGGTGGTGC
AATGCCACCAAATCTTGGTCAAGCTTTCAAGAACCACATGAGCGAGATGT
TTGCATACCATGCGACCATGATGTCCAACACGCTTGGAACTTCCATCGTT
GTCTTCACTAGAACTGGTTTTATGGCTATATTACTGAGCCATTATCGACC
TTCTGGCACTATATTTGCCTTCACAAATGAGAAGAGGATTCAGCAAAGGC
TGTCTTTGTATCAAGGAGTTTGCCCCATCTACATGGAGTTCTCAGACGAT
GCTGAAGAAACCTTTGACAATGCCTTAGGTTTATTGCAGAAACAAGGAAT
GGTAAAGGAAGGAGAAGAGGTAGCACTTCTTCAGAGTGGCAGACAACCCA
TCTGGCGGTTCCAATCCACTCACAATATTCAGGTCCGNCAAGTGTAGACA
CAGAGCGG
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