FC875675

Overview
NameFC875675
Unique NameFC875675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10993 contig Ccv1_Contig10993:288..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_THEMA (Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 70/199 (35.18%), Postives = 112/199 (56.28%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFK------NHMSEMFAYHATMMSNTLGTSIVVF-TRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            +EII+  +   K VIVAT +LESMI +P PTRAEV+DIA A+ +GADA++L+ ETA GK PL+A+KV+  V+   E  +          + F+      + +SE  ++    +S +L   +++  T +G  A+ +S Y  S  I A T E++   RLSL + V P+  E      E  +  L  +++ G+ ++G+ V L
Sbjct:  258 KEIIKLSKYYSKPVIVATQILESMIENPFPTRAEVTDIANAIFDGADALLLTAETAVGKHPLEAIKVLSKVAKEAEKKL----------EFFRTIEYDTSDISEAISHACWQLSESLNAKLIITPTISGSTAVRVSKYNVSQPIVALTPEEKTYYRLSLVRKVIPVLAEKCSQELEFIEKGLKKVEEMGLAEKGDLVVL 446          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_DEBHA (Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 76/232 (32.76%), Postives = 111/232 (47.84%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL------------GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            +++I  C    K VI AT MLESM  +P PTRAEVSD+  A+ +GAD VMLSGETA G +P +AV +MH  ++  E  I          Q   N +  + A   T  + T               +IVV + +GF + L+S Y+P+  +   T   R  +   LY+GV P   E      + +D E     A+      G++K+G+ +  +Q      W   S H+  VR V
Sbjct:  285 KQLIAKCNLAAKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPFEAVSMMHNTAIIAEKAIA--------YQPLHNEIRSL-ANRPTPTTETCAMASVSAAYEQDAKAIVVLSTSGFTSRLVSKYKPNVPVMMVTRNHRAARYCHLYRGVYPFVYEKKTVDNWQEDVENRLRWAVSEAIDLGIIKKGDSIVTIQG-----WTRGSGHSNTVRVV 502          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 66/193 (34.20%), Postives = 104/193 (53.89%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVF-TRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            + +I  C   GK VI AT ML+SM  +P PTRAE SD+A A+ +G DA+MLSGETA G +P+++V+ M  ++L TEA I   ++     +    +M+E     A   +  L    V+  T +G  A +++ YRP   + A T+ +   ++LSL  GV PI  + +   +E    ++    K   V  G+ V +
Sbjct:  261 KNLIEKCNQAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGIYPVESVQTMDRIALTTEAAIDYRSVVSTRRREKHGNMTEAIGQAAAYTAINLKVKAVLAPTESGHTAKMIAKYRPGCPVIAVTSSEMCSRKLSLIWGVYPIVGKKASSIDEILQESVEESVKHQYVGHGDVVII 453          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.933e-23
Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTS-------IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALL 581
            I+  C + GK VI AT MLESMI +P PTRAE +D+A AV +G+D VMLSGETA G +P +AV +M  +    E  +        L  A K   ++  +   T+ S  + T+       I+  T TG  A L+S YRPS  I A T+     + L   +G  P  +E     ++  ++ L    K  + K+G  V ++
Sbjct:  283 IVSKCNAAGKPVITATQMLESMIKNPRPTRAEATDVANAVLDGSDCVMLSGETASGDYPYEAVDIMAKICREAE-LVESSTDYQTLFAALKLSSAKPVSIAETVASYAVATAIDLKADLIITLTETGLTARLVSKYRPSIPIIAVTSWSYTVKHLLATRGAIPFLVESLVGTDKLVESCLEYAMKHNLCKKGSRVVIV 479          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_LACLA (Pyruvate kinase OS=Lactococcus lactis subsp. lactis GN=pyk PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 8.533e-23
Identity = 63/193 (32.64%), Postives = 109/193 (56.48%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG-GAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVV-FTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALL 581
            II      GK V+ ATNMLESM  +P  TR+E+SD+  AV +G DA MLSGE+A+GK+P ++V+ M TV+   +  +   G + P   +  K+ ++E+ A      +  +   ++V  T +G  A L+S +RP+  I A T ++++++ L +  GV P   E     ++ F+ A  +    G+V+ G+ + ++
Sbjct:  293 IISKVNKAGKIVVTATNMLESMTYNPRATRSEISDVFNAVIDGTDATMLSGESANGKYPRESVRTMATVNKNAQTMLKEYGRLHPE--RYDKSTVTEVVAASVKNAAEAMDIKLIVALTESGNTARLISKHRPNADILAITFDEKVERGLMINWGVIPTMTEKPSSTDDMFEVAEKVALASGLVESGDNIIIV 483          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_EIMTE (Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.533e-23
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHM--SEMFAYHATMMSNTLGTSIVV-FTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPI 602
            +I  C   GK VI AT MLESM  +P PTRAE +D+A AV +G D VMLSGETA+G FP++AV VM  V    E  I    +     QA    +   E  A  A   + ++  S+++  T TG  A L++ YRP   I A +  +   ++L + +GV    +      ++   NAL   ++  +V EG+ +  +   ++ +
Sbjct:  318 MISKCNVAGKPVITATQMLESMTKNPRPTRAEAADVANAVLDGTDCVMLSGETANGSFPVQAVTVMSRVCFEAEGCIDYQQVFRATCQATMTPIDTQEAVARAAVETAQSINASLILALTETGRTARLIAKYRPMQPILALSASEETIKQLQVIRGVTTFLVPTFQGTDQLIRNALSAAKELQLVSEGDSIVAVHGIKEEV 518          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_HAEIN (Pyruvate kinase OS=Haemophilus influenzae GN=pykA PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.455e-22
Identity = 70/199 (35.18%), Postives = 105/199 (52.76%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--TSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGR 593
            +++IR  R + +AVI AT M+ESMI +P PTRAEV D+A AV +G DAVMLS ETA G++P + V  M +V L  E   +       + + F+  + E  A  A   +N +    +IV  + TG   +L+S       IFA +  +      +LY+GV PIY       E     A   L+++G +  G+ V + Q G+
Sbjct:  267 KKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFET-IEESVAMSAMYAANHMKGVAAIVTLSSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPIYHGEESRTEAGAKAAPQSLKEKGYLSTGDLVLVTQGGQ 464          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_THEAC (Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0896 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.901e-22
Identity = 71/217 (32.72%), Postives = 123/217 (56.68%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFK-NHMSEMFAYHATMMSNTL-GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEE-TFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            + II+T    G   IVAT +LESM+ + +PTRAE+SDI  A+ + ADA+MLS E+A GK+P++AV+ +  VS   E  ++  +        FK N ++   A  A ++S+ +    IV  T TG    ++S  RP   ++A T  + + ++L++Y GV P++ME   +AE+ +F   +  + + G   +G +  L+ +   P + F  T++++V  V
Sbjct:  243 KHIIKTAHEDGDFTIVATQVLESMVNNSSPTRAEISDITNAIIDNADALMLSEESAIGKYPVQAVRTLKEVSDYVEDKVSFDS-----SYYFKGNTIAYSVARAAKILSDDIKSDGIVALTHTGSTVRMISSLRPKAMVYAATVSESLARKLNIYFGVLPLHME--GNAEDLSFSEIMEYIVRSGRFADGSK--LVMTSGDPYFTFGGTNDVKVAVV 450          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_CHLMU (Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.235e-22
Identity = 62/159 (38.99%), Postives = 87/159 (54.72%), Query Frame = 3
Query:   15 RTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAM----PPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPI 479
            R  R  G+  I AT MLESMI +P PTRAEVSD+A A+ +G  AVMLSGETA G +P++AVK M ++   TE +    A       N       ++  + A    +       +I+V+T+TG   + LS YRP   I A T  + +  RL++  GV P+
Sbjct:  264 RVSRETGRFCITATQMLESMIRNPLPTRAEVSDVANAIHDGTSAVMLSGETASGTYPIEAVKTMRSIIQETEKSFDYQAFFQLNDKNSALKVSPYLEAIGASGIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAVTPNRNVYYRLAVEWGVYPM 422          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK2_CANGA (Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.235e-22
Identity = 72/203 (35.47%), Postives = 100/203 (49.26%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMS--EMFAYHATMMSNTLGTS-IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +++I  C   GK VI AT MLESM  +P PTRAEVSD+  A+ +GAD VMLSGETA G +P+ AV  M   ++  E  I    +  +L        S  E  A  A       G   I+V + +G  A L+S YRP   I   T   R  +   L++GV P   E      +S+D        + + ++ G VK G+ V  +Q
Sbjct:  282 KKLIAKCNLAGKPVICATQMLESMTFNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAIIAERAIAYMPLYDDLRNCTPKPTSTTETVAASAVAAVQEQGAKLILVLSTSGNTARLVSKYRPQCPIVLVTRNPRTARFSHLFRGVFPFVYEKEPLDDWSEDTHARLRFGVDMAKEYGFVKNGDAVISIQ 484          
The following BLAST results are available for this feature:
BLAST of FC875675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK_THEMA1.719e-2335.18Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1... [more]
KPYK_DEBHA1.719e-2332.76Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 P... [more]
KPYK_BACPY1.719e-2334.20Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK_DICDI2.933e-2334.85Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK_LACLA8.533e-2332.64Pyruvate kinase OS=Lactococcus lactis subsp. lacti... [more]
KPYK_EIMTE8.533e-2333.83Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=... [more]
KPYK_HAEIN1.455e-2235.18Pyruvate kinase OS=Haemophilus influenzae GN=pykA ... [more]
KPYK_THEAC1.901e-2232.72Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0... [more]
KPYK_CHLMU4.235e-2238.99Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3... [more]
KPYK2_CANGA4.235e-2235.47Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC31401E12EF CTVClemen1 Citrus clementina cDNA clone C31401E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875675 ID=FC875675; Name=FC875675; organism=Citrus clementina; type=EST; length=658bp
AGGAAGAGATAATAAGGACTTGTCGTAGCATGGGGAAAGCTGTTATTGTG
GCCACCAATATGTTGGAAAGCATGATTGTTCATCCAACTCCAACCAGAGC
AGAGGTCTCAGACATTGCCATTGCTGTCCGAGAGGGTGCTGACGCCGTCA
TGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCATTGAAAGCCGTGAAA
GTAATGCACACTGTCTCATTACGGACTGAAGCAACCATAACAGGTGGTGC
AATGCCACCAAATCTTGGTCAAGCTTTCAAGAACCACATGAGCGAGATGT
TTGCATACCATGCGACCATGATGTCCAACACGCTTGGAACTTCCATCGTT
GTCTTCACTAGAACTGGTTTTATGGCTATATTACTGAGCCATTATCGACC
TTCTGGCACTATATTTGCCTTCACAAATGAGAAGAGGATTCAGCAAAGGC
TGTCTTTGTATCAAGGAGTTTGCCCCATCTACATGGAGTTCTCAGACGAT
GCTGAAGAAACCTTTGACAATGCCTTAGGTTTATTGCAGAAACAAGGAAT
GGTAAAGGAAGGAGAAGAGGTAGCACTTCTTCAGAGTGGCAGACAACCCA
TCTGGCGGTTCCAATCCACTCACAATATTCAGGTCCGNCAAGTGTAGACA
CAGAGCGG
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