FC875675

Overview
NameFC875675
Unique NameFC875675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10993 contig Ccv1_Contig10993:288..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK1_PHOLE (Pyruvate kinase I (Fragment) OS=Photobacterium leiognathi GN=pki PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21
Identity = 64/195 (32.82%), Postives = 100/195 (51.28%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKN---HMSEMFAYHATMMSNTLGTS-IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALL 581
            +I  C    K VI AT ML+SMI +P PTRAE  D+A A+ +G DAVMLSGE+A GK+P++AV +M  +  RT+  +      P LG    +    ++E     A   +  L    I+V T  G  A  +  Y P+  I A T   +   +L L +GV P+ ++  +  +  +     L  + G+  +G+ V ++
Sbjct:   28 MIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAIMDGTDAVMLSGESAKGKYPIEAVTIMAQICARTDDVV-----KPELGSRLDSPRLRITEAVCKGAVDTAEKLNAPLIIVATEAGKSARSVRKYFPTARILAVTTNTKTAAQLCLSKGVTPVVVDSIESTDAFYLRGKELALETGLGAKGDIVVMV 217          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21
Identity = 80/213 (37.56%), Postives = 110/213 (51.64%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMS--EMFAYHATMMSNTLGTS-IVVFTRTGFMAILLSHYRPSGTI------------FAFTNEKRIQQRLSL-YQGVCPIYMEFS---DDAEET---FDNALGLLQKQGMVKEGEEVALL 581
            +I  C  +GK V+ AT MLESMI  P PTRAE +D+A AV +G D VMLSGE+A G +P  AVK+M  + +  E+++  GA+   + ++    MS  E  A  A   +N      IVV TR G  A L++ YRP+  I            F +T       R SL Y+G+ PI  E S    DAE T    + AL    ++ + K G+ V  L
Sbjct:  284 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPELAVKIMARICIEAESSLDYGAIFKEMIRSTPLPMSPLESLASSAVRTANKAKAKLIVVLTRGGSTAKLVAKYRPAVPILSVVVPVLSTDSFDWTCSDETPARHSLIYRGLIPILGEGSAKATDAESTEVILEAALKSATERALCKPGDAVVAL 496          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK1_CANGA (Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21
Identity = 71/207 (34.30%), Postives = 106/207 (51.21%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-------SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +++I      GK VI AT MLESM  +P PTRAEVSD+  AV +GAD VMLSGETA G +P+ AV  M   +L  E  I   A  PN     +N   +  +   T+ ++ +         +I+V + +G  A L+S YRP+  I   T   R  +   LY+GV P   E      +++D E   +  +    + G++K+G+    +Q
Sbjct:  282 KKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAVLDGADCVMLSGETAKGNYPINAVTTMAETALIAEQAI---AYLPNYDD-IRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTARLVSKYRPNCPIILVTRNARTARFSHLYRGVFPFVYEKESVSDWTEDVEARLNFGIEQAIEFGILKKGDTYVSIQ 484          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 66/198 (33.33%), Postives = 103/198 (52.02%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL-GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQP 599
            +I  C    K VI AT ML+SMI +P PTRAE  D+A A+ +G DAVMLSGE+A GK+PL+AV +M T+  RT+  +       N   + K  ++E     A   +  L    IVV T+ G  A  +  Y P  TI A T  +   ++L L +GV    ++  +  ++ +     +  + G+ ++G+ V ++     P
Sbjct:  263 MIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLDYNN--DSRKLRITEAVCRGAVETAEKLEAPLIVVATQGGKSARAVRKYFPDATILALTTNEVTARQLVLSKGVVSQLVKEINSTDDFYRLGKDVALQSGLAQKGDVVVMVSGALVP 458          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 66/198 (33.33%), Postives = 103/198 (52.02%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL-GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQP 599
            +I  C    K VI AT ML+SMI +P PTRAE  D+A A+ +G DAVMLSGE+A GK+PL+AV +M T+  RT+  +       N   + K  ++E     A   +  L    IVV T+ G  A  +  Y P  TI A T  +   ++L L +GV    ++  +  ++ +     +  + G+ ++G+ V ++     P
Sbjct:  263 MIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLDYNN--DSRKLRITEAVCRGAVETAEKLKAPLIVVATQGGKSARAVRKYFPDATILALTTNEVTARQLVLSKGVVSQLVKEINSTDDFYRLGKDVALQSGLAQKGDVVVMVSGALVP 458          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_CHLTR (Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE=3 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.362e-20
Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 3
Query:   15 RTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAM----PPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPI 479
            R  R  G+  I AT MLESMI +P PTRAEVSD+A A+ +G  AVMLSGETA G  P+ AVK M ++   TE T    A       N       ++  +      +       +I+V+T+TG   + LS YRP   I A T  + +  RL++  GV P+
Sbjct:  264 RASRETGRFCITATQMLESMIRNPLPTRAEVSDVANAIYDGTSAVMLSGETALGAHPVHAVKTMRSIIQETEKTFDYHAFFQLNDKNSALKVSPYLEAIGFSGIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAVTPNRNVYYRLAVEWGVYPM 422          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK1_YEAST (Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=PYK1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.779e-20
Identity = 69/207 (33.33%), Postives = 106/207 (51.21%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-------SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +++I      GK VI AT MLESM  +P PTRAEVSD+  A+ +GAD VMLSGETA G +P+ AV  M   ++  E  I   A  PN     +N   +  +   T+ ++ +         +I+V + +G    L+S YRP+  I   T   R  +   LY+GV P   E      ++DD E   +  +   ++ G++K+G+    +Q
Sbjct:  281 KKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAI---AYLPNYDD-MRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSIQ 483          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.779e-20
Identity = 74/218 (33.94%), Postives = 113/218 (51.83%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMM---SNTLGTSIVVFTRTGFMAILLSHYRPSGTI--------------FAFTNEKRIQQRLSLYQGVCPIY------MEFSDDAEETFDNALGLLQKQGMVKEGEE-VALLQSG 590
            +I  C  MGK V+ AT MLESMI  P PTRAE +D+A AV +G D VMLSGETA G +P  AV+ M  + +  E+T+  G +   +       MS M +  ++ +   +++  T ++V TR G  A L++ YRP   I              +A +NE   +  L +Y+G+ P+           +  EET + A    +K+ + K G+  VAL ++G
Sbjct:  270 MIYKCNFMGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPELAVRTMAKICVEAESTLDYGDIFKRIMLHAAVPMSPMESLASSAVRTATSSRATLMMVLTRGGSTARLVAKYRPGIPILSVVVPEITSDSFDWACSNEAPARHSL-IYRGLVPVLYAGSARASIDESTEETLEFASEYGKKKQLCKTGDSVVALFRTG 486          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_AGABI (Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.035e-20
Identity = 62/161 (38.51%), Postives = 91/161 (56.52%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHA-TMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIY 482
            +I  C  +GK VIVAT MLESM  +P PTRAEVSD+A AV +G+D VMLSGETA G +P+++V +M    L  E  I    +  +L   QA     +E  A  A    +     +++V + +G  A L+S YRP   I   T  ++  +++ L++G  P +
Sbjct:  297 MIAKCNIVGKPVIVATQMLESMTYNPRPTRAEVSDVANAVLDGSDCVMLSGETAKGSYPVQSVLMMAETCLLAETAICYPPLYDDLRAVQARPTETAETVAIAAVAAAAEQDAKALLVLSTSGETARLVSKYRPKIPIITVTRNEQTARQIHLHRGCYPFW 457          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.035e-20
Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMS--EMFAYHATMMSNTLGTS-IVVFTRTGFMAILLSHYRPSGTI------------FAFTNEKRIQQRLSL-YQGVCPIYMEFS---DDAEET---FDNALGLLQKQGMVKEGEEVALL 581
            +I  C   GKAV+ AT MLESMI  P PTRAE +D+A AV +G D VMLSGE+A G +P  AVK+M  + +  E+++   A+   + +     MS  E  A  A   +N      IVV TR G  A L++ YRP+  I            F ++       R SL Y+G+ P+  E S    D+E T    + AL     +G+ K G+ V  L
Sbjct:  283 MIYKCNLAGKAVVTATQMLESMIKSPAPTRAEATDVANAVLDGTDCVMLSGESAAGAYPELAVKIMSRICIEAESSLDNEAIFKEMIRCTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGSTAKLVAKYRPAVPILSVVVPVLTTDSFDWSISDETPARHSLVYRGLIPLLGEGSAKATDSESTEVILEAALKSAVTRGLCKPGDAVVAL 495          
The following BLAST results are available for this feature:
BLAST of FC875675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK1_PHOLE3.585e-2132.82Pyruvate kinase I (Fragment) OS=Photobacterium lei... [more]
KPYC_SOYBN4.682e-2137.56Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYK1_CANGA6.115e-2134.30Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3... [more]
KPYK1_SALTY1.043e-2033.33Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI1.043e-2033.33Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK_CHLTR1.362e-2038.99Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE... [more]
KPYK1_YEAST1.779e-2033.33Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=P... [more]
KPYC_ARATH1.779e-2033.94Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYK_AGABI3.035e-2038.51Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 ... [more]
KPYC_SOLTU3.035e-2036.62Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]

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Properties
Property NameValue
Genbank descriptionC31401E12EF CTVClemen1 Citrus clementina cDNA clone C31401E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875675 ID=FC875675; Name=FC875675; organism=Citrus clementina; type=EST; length=658bp
AGGAAGAGATAATAAGGACTTGTCGTAGCATGGGGAAAGCTGTTATTGTG
GCCACCAATATGTTGGAAAGCATGATTGTTCATCCAACTCCAACCAGAGC
AGAGGTCTCAGACATTGCCATTGCTGTCCGAGAGGGTGCTGACGCCGTCA
TGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCATTGAAAGCCGTGAAA
GTAATGCACACTGTCTCATTACGGACTGAAGCAACCATAACAGGTGGTGC
AATGCCACCAAATCTTGGTCAAGCTTTCAAGAACCACATGAGCGAGATGT
TTGCATACCATGCGACCATGATGTCCAACACGCTTGGAACTTCCATCGTT
GTCTTCACTAGAACTGGTTTTATGGCTATATTACTGAGCCATTATCGACC
TTCTGGCACTATATTTGCCTTCACAAATGAGAAGAGGATTCAGCAAAGGC
TGTCTTTGTATCAAGGAGTTTGCCCCATCTACATGGAGTTCTCAGACGAT
GCTGAAGAAACCTTTGACAATGCCTTAGGTTTATTGCAGAAACAAGGAAT
GGTAAAGGAAGGAGAAGAGGTAGCACTTCTTCAGAGTGGCAGACAACCCA
TCTGGCGGTTCCAATCCACTCACAATATTCAGGTCCGNCAAGTGTAGACA
CAGAGCGG
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