FC875675

Overview
NameFC875675
Unique NameFC875675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10993 contig Ccv1_Contig10993:288..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_LEIME (Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20
Identity = 61/163 (37.42%), Postives = 90/163 (55.21%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMS---EMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME 488
            +I  C   GK VI AT MLESM  +P PTRAEVSD+A AV  GAD VMLSGETA GK+P + V+ M  + L  ++ +       ++ +     MS    +       +S T   ++VV + TG  A L++ YRP+  I   T   +  ++L++ QGV  ++ +
Sbjct:  282 LISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCGSAVNSVSETKAKAMVVLSNTGAGARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFD 444          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20
Identity = 65/201 (32.34%), Postives = 105/201 (52.24%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL---GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFS-----DDAEETFDNALGLLQKQGMVKEGEEVALLQS 587
            II  C  +GK VI AT MLESM  +P PTRAEVSD+A AV  GAD VMLSGETA GK+P + V+ M  + +  ++      M  ++    K  M    A  ++ +++       +++V + TG  A L+S YRP+  I   T   +  ++L++ + V  ++ + +      D E+     L   +K+     G+ V ++ +
Sbjct:  282 IISKCNVVGKPVICATQMLESMTSNPRPTRAEVSDVANAVLNGADCVMLSGETAKGKYPNEVVQYMARICVEAQSATHDTVMFNSIKNLQKIPMCPEEAVCSSAVASAFEVQAKAMLVLSNTGRSARLISKYRPNCPIICVTTRLQTCRQLNVTRSVVSVFYDAAKSGEDKDKEKRVKLGLDFAKKEKYASTGDVVVVVHA 482          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20
Identity = 65/201 (32.34%), Postives = 105/201 (52.24%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL---GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFS-----DDAEETFDNALGLLQKQGMVKEGEEVALLQS 587
            II  C  +GK VI AT MLESM  +P PTRAEVSD+A AV  GAD VMLSGETA GK+P + V+ M  + +  ++      M  ++    K  M    A  ++ +++       +++V + TG  A L+S YRP+  I   T   +  ++L++ + V  ++ + +      D E+     L   +K+     G+ V ++ +
Sbjct:  282 IISKCNVVGKPVICATQMLESMTSNPRPTRAEVSDVANAVLNGADCVMLSGETAKGKYPNEVVQYMARICVEAQSATHDTVMFNSIKNLQKIPMCPEEAVCSSAVASAFEVQAKAMLVLSNTGRSARLISKYRPNCPIICVTTRLQTCRQLNVTRSVVSVFYDAAKSGEDKDKEKRVKLGLDFAKKEKYASTGDVVVVVHA 482          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20
Identity = 77/220 (35.00%), Postives = 104/220 (47.27%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMS---------EMFAYHATMMSNTLGTS-IVVFTRTGFMAILLSHYRPSGTI------------FAFTNEKRIQQRLSL-YQGVCPIY------MEFSDDAEETFDNALGLLQKQGMVKEGEEVALL 581
            +I  C   GK V+ AT MLESMI  P PTRAE +D+A AV +G D VMLSGETA G +P  AV  M  + +  E+TI       +    FK  MS         E  A  A   +N+   + I+V TR G  A L++ YRP   I            F +T       R SL ++G+ P+           +  EE  D AL   + +G+ K+G+ V  L
Sbjct:  281 MIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPDLAVGTMAKICIEAESTI-------DYPDVFKRIMSNAPVPMSPLESLASSAVRTANSAKAALILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDSFDWTCSDESPARHSLIFRGLVPVLHAGSARASHEESTEEALDFALQHAKTKGLCKQGDSVVAL 493          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_SCHPO (Pyruvate kinase OS=Schizosaccharomyces pombe GN=pyk1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 69/204 (33.82%), Postives = 105/204 (51.47%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHM------SEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +I  C   GK V  AT MLESM  +P PTRAEVSD+  AV +GAD VMLSGET  G +P++AV  M   +   EA+I  G++   +    +  +      + + A  A++ S+    +IVV + +G  A L S YRPS  I   T   +  ++  L +GV P+  E      +  D +           K  ++K+G+++ +LQ
Sbjct:  290 MIAKCNIAGKPVACATQMLESMTYNPRPTRAEVSDVGNAVLDGADLVMLSGETTKGSYPVEAVTYMAETARVAEASIPYGSLYQEMFGLVRRPLECATETTAVAAIGASIESD--AKAIVVLSTSGNTARLCSKYRPSIPIVMVTRCPQRARQSHLNRGVYPVIYEKEPLSDWQKDVDARVAYGCQQAYKMNILKKGDKIIVLQ 491          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_SACCA (Pyruvate kinase OS=Saccharomyces castellii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 70/203 (34.48%), Postives = 100/203 (49.26%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMS---NTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGL---LQK---QGMVKEGEEVALLQ 584
            +++I      GK VI AT MLESM  +P PTRAEVSD+  A+ +GAD VMLSGETA G +P+ AV  M   +L  E  I    +  +L        S      A+ ++        +I+V + +G    L+S YRP   I   T   R  +   L +GV P   E    A+ T D  L L   ++K    G++K+G+    +Q
Sbjct:  282 KKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMADTALIAEQAIAYQPLYDDLRNLTPKPTSTTETVAASAVAAVYEQKAKAIIVLSTSGTTPRLVSKYRPDCPIILVTRNPRAARFSHLSRGVFPFVYEADSVADWTEDVELRLKFGIEKAIEMGVMKKGDTYVSIQ 484          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_PYRAE (Pyruvate kinase OS=Pyrobaculum aerophilum GN=pyk PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.175e-18
Identity = 53/175 (30.29%), Postives = 92/175 (52.57%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGL 533
            I+ T    GK + VAT +L+SM   P PTRAE++D+      G D++ L+ ETA GK+PL AV  +  + +  E  I    +  N    F   + E        ++  LG +I+VF+ +G +A  ++ +RP G ++  T   R+ + LS+   + P+Y+  +++ EE  +  + L
Sbjct:  273 IVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQSPLLQNSRDRFAKGLVE--------LAQDLGANILVFSMSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISL 438          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_MYCIT (Pyruvate kinase OS=Mycobacterium intracellulare GN=pyk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16
Identity = 65/212 (30.66%), Postives = 101/212 (47.64%), Query Frame = 3
Query:   12 IRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL-GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            I+  R   K VIVAT ML+SMI +  PTRAE SD+A AV +GADAVMLSGET+ GK+P+ AV+ M  +    E   T      ++ +  +     + +Y A  +   L   ++V FT++G     L+       + AFT    ++ +L++  G     +                L + G  K G+ V ++     P     ST+ I V ++
Sbjct:  262 IQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPMAAVRTMSRIICAVEDNSTAAPPLTHVPRTKRG----VISYAARDIGERLDAKALVAFTQSGDTVKRLARLHTPLPLLAFTAWPEVRSQLAMTWGTETFIVPMMTSTGGMIRQVDKSLLELGRYKRGDLVVIVAGA--PPGTVGSTNLIHVHRI 467          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_MYCTU (Pyruvate kinase OS=Mycobacterium tuberculosis GN=pyk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16
Identity = 55/153 (35.95%), Postives = 83/153 (54.25%), Query Frame = 3
Query:   12 IRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL-GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQG 467
            I+  R   K VIVAT ML+SMI +  PTRAE SD+A AV +GADA+MLSGET+ GK+PL AV+ M  +    E   T      ++ +  +     + +Y A  +   L   ++V FT++G     L+       + AFT    ++ +L++  G
Sbjct:  262 IQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADALMLSGETSVGKYPLAAVRTMSRIICAVEENSTAAPPLTHIPRTKRG----VISYAARDIGERLDAKALVAFTQSGDTVRRLARLHTPLPLLAFTAWPEVRSQLAMTWG 410          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_METJA (Pyruvate kinase OS=Methanocaldococcus jannaschii GN=MJ0108 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16
Identity = 70/215 (32.56%), Postives = 108/215 (50.23%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVF-TRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            + I+R     G   I AT +L+SMI +P PTRAEV+DIA A+ +G D +MLS ET  GK+P++A+KV++ V+   +           L       + E   Y    +   L T +V+  T +G  A L+S  R +  I A T   R  +RL L  GV    ME  DD E+  +    + +K+     G+ + L+  G  PI + + T+ I+V  +
Sbjct:  242 KNILRIANRYGILSITATQILDSMINNPFPTRAEVTDIANAIYDGTDCLMLSNETTIGKYPIEAIKVLNKVAKVADEHYEEFGDRVCLE---VESIDEGLVYAVYELYKKLNTKLVITPTYSGRTAKLISKLRINSKIIAPTPNIRTLKRLRLVWGVESCLMEEFDDMEKIINTCREMAKKE----IGKGIYLITLG-HPIGQ-KKTNTIKVESI 447          
The following BLAST results are available for this feature:
BLAST of FC875675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK_LEIME3.964e-2037.42Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1... [more]
KPYK2_TRYBB3.964e-2032.34Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]
KPYK1_TRYBB3.964e-2032.34Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYC_TOBAC8.830e-2035.00Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYK_SCHPO1.506e-1933.82Pyruvate kinase OS=Schizosaccharomyces pombe GN=py... [more]
KPYK_SACCA1.506e-1934.48Pyruvate kinase OS=Saccharomyces castellii GN=PYK1... [more]
KPYK_PYRAE2.175e-1830.29Pyruvate kinase OS=Pyrobaculum aerophilum GN=pyk P... [more]
KPYK_MYCIT3.472e-1630.66Pyruvate kinase OS=Mycobacterium intracellulare GN... [more]
KPYK_MYCTU4.535e-1635.95Pyruvate kinase OS=Mycobacterium tuberculosis GN=p... [more]
KPYK_METJA4.535e-1632.56Pyruvate kinase OS=Methanocaldococcus jannaschii G... [more]

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Properties
Property NameValue
Genbank descriptionC31401E12EF CTVClemen1 Citrus clementina cDNA clone C31401E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875675 ID=FC875675; Name=FC875675; organism=Citrus clementina; type=EST; length=658bp
AGGAAGAGATAATAAGGACTTGTCGTAGCATGGGGAAAGCTGTTATTGTG
GCCACCAATATGTTGGAAAGCATGATTGTTCATCCAACTCCAACCAGAGC
AGAGGTCTCAGACATTGCCATTGCTGTCCGAGAGGGTGCTGACGCCGTCA
TGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCATTGAAAGCCGTGAAA
GTAATGCACACTGTCTCATTACGGACTGAAGCAACCATAACAGGTGGTGC
AATGCCACCAAATCTTGGTCAAGCTTTCAAGAACCACATGAGCGAGATGT
TTGCATACCATGCGACCATGATGTCCAACACGCTTGGAACTTCCATCGTT
GTCTTCACTAGAACTGGTTTTATGGCTATATTACTGAGCCATTATCGACC
TTCTGGCACTATATTTGCCTTCACAAATGAGAAGAGGATTCAGCAAAGGC
TGTCTTTGTATCAAGGAGTTTGCCCCATCTACATGGAGTTCTCAGACGAT
GCTGAAGAAACCTTTGACAATGCCTTAGGTTTATTGCAGAAACAAGGAAT
GGTAAAGGAAGGAGAAGAGGTAGCACTTCTTCAGAGTGGCAGACAACCCA
TCTGGCGGTTCCAATCCACTCACAATATTCAGGTCCGNCAAGTGTAGACA
CAGAGCGG
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