FC875675

Overview
NameFC875675
Unique NameFC875675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_CORGL (Pyruvate kinase OS=Corynebacterium glutamicum GN=pyk PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15
Identity = 64/177 (36.16%), Postives = 92/177 (51.98%), Query Frame = 3
Query:   12 IRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQG----VCPIYMEFSDDAEETFDNAL 527
            I+  R   K VIVAT ML+SMI +  PTRAE SD+A AV +GADAVMLSGET+ GK P   V+ M  +    E   T G + P+L    +     + +Y A  ++  L   ++V FT +G  A  ++       +  FT  + ++  L+L  G    +CP   + +DD     D AL
Sbjct:  262 IQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKDPHNVVRTMSRIVRFAE---TDGRV-PDLTHIPRTKRG-VISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNEAVRSELALTWGATTFLCPPVSD-TDDMMREVDRAL 432          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_AERPE (Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15
Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPI 479
            E I+   R   K V++AT  L SMI  P PTR+EV DI  AV + ADA+ML+GETA GK+P+K+V+ M  +S R    +     PP   +          A     ++ +L + +VV+++TG  A  L+ ++P  T +     + +++ +    G  PI
Sbjct:  253 ELIVWEARKRYKTVVLATEFLSSMIEKPVPTRSEVVDIYQAVLQTADALMLTGETAIGKYPVKSVQWMAKISSRAYKKL--ATSPPERPRPTSTPYK--LALGLVELAESLDSPLVVYSKTGRFAERLASFKPLKTFYVGVPSREVERVVRHLWGAEPI 407          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_COREF (Pyruvate kinase OS=Corynebacterium efficiens GN=pyk PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15
Identity = 64/177 (36.16%), Postives = 93/177 (52.54%), Query Frame = 3
Query:   12 IRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQG----VCPIYMEFSDDAEETFDNAL 527
            I+  R   K VIVAT ML+SMI +  PTRAE SD+A AV +GADAVMLSGET+ GK P   V+ M  +    E   T G + P+L    +     + +Y A  ++  L   ++V FT +G  A  L+       +  FT +  ++ +L+L  G    +CP  ++ +D      D AL
Sbjct:  262 IQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKDPHNVVRTMSRIVRFAE---TDGRV-PDLTHIPRTKRG-VISYSARDIAERLNARALVAFTTSGDTAKRLARLHSHLPLLVFTPDPSVRSQLALTWGAQTFLCP-KVDDTDGMMREVDRAL 432          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_ENCCU (Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 58/177 (32.77%), Postives = 85/177 (48.02%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGL 533
            + I+   +  G+ VI AT M+ESM +   P R+E+SD+  AV +G D VMLS E+A G FP++ VK M ++    E                 +  S   A    + S   G  I   T +    I LS  +P   I   +    I +R S+Y+G+ P+Y + S+DAE T    LGL
Sbjct:  344 KRILYEVKREGRPVICATQMMESMTLKNAPNRSEISDVGNAVLDGCDCVMLSAESAVGMFPVETVKFMRSICADAER---------------YDMESRKGAGACGVSSYVDGVVICSGTESQIEKIYLS--KPETPIIVISESLWILRRFSIYRGIIPVYGKGSEDAEATL-RRLGL 502          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_MYCPN (Pyruvate kinase OS=Mycoplasma pneumoniae GN=pyk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13
Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 230
            +I+ CR   K VI AT ML+S+  +  PTRAEV+D+  AV  G DA MLSGETA+G FPL AV VM  +  ++E
Sbjct:  292 MIKACRFFNKRVITATQMLDSLEKNIQPTRAEVTDVYFAVDRGNDATMLSGETANGAFPLNAVYVMKMIDKQSE 365          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_MYCGE (Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.973e-12
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 230
            +I+ CR   K  I AT ML+S+  +  PTRAEV+D+  AV  G DA MLSGETA G +PL AV VM  +  ++E
Sbjct:  292 MIKACRFFNKRSITATQMLDSLEKNIQPTRAEVTDVYFAVDRGNDATMLSGETASGLYPLNAVAVMQKIDKQSE 365          
The following BLAST results are available for this feature:
BLAST of FC875675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK_CORGL3.839e-1536.16Pyruvate kinase OS=Corynebacterium glutamicum GN=p... [more]
KPYK_AERPE3.839e-1533.33Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV... [more]
KPYK_COREF6.548e-1536.16Pyruvate kinase OS=Corynebacterium efficiens GN=py... [more]
KPYK_ENCCU1.905e-1432.77Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK... [more]
KPYK_MYCPN2.751e-1352.70Pyruvate kinase OS=Mycoplasma pneumoniae GN=pyk PE... [more]
KPYK_MYCGE3.973e-1250.00Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE... [more]

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Properties
Property NameValue
Genbank descriptionC31401E12EF CTVClemen1 Citrus clementina cDNA clone C31401E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875675 ID=FC875675; Name=FC875675; organism=Citrus clementina; type=EST; length=658bp
AGGAAGAGATAATAAGGACTTGTCGTAGCATGGGGAAAGCTGTTATTGTG
GCCACCAATATGTTGGAAAGCATGATTGTTCATCCAACTCCAACCAGAGC
AGAGGTCTCAGACATTGCCATTGCTGTCCGAGAGGGTGCTGACGCCGTCA
TGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCATTGAAAGCCGTGAAA
GTAATGCACACTGTCTCATTACGGACTGAAGCAACCATAACAGGTGGTGC
AATGCCACCAAATCTTGGTCAAGCTTTCAAGAACCACATGAGCGAGATGT
TTGCATACCATGCGACCATGATGTCCAACACGCTTGGAACTTCCATCGTT
GTCTTCACTAGAACTGGTTTTATGGCTATATTACTGAGCCATTATCGACC
TTCTGGCACTATATTTGCCTTCACAAATGAGAAGAGGATTCAGCAAAGGC
TGTCTTTGTATCAAGGAGTTTGCCCCATCTACATGGAGTTCTCAGACGAT
GCTGAAGAAACCTTTGACAATGCCTTAGGTTTATTGCAGAAACAAGGAAT
GGTAAAGGAAGGAGAAGAGGTAGCACTTCTTCAGAGTGGCAGACAACCCA
TCTGGCGGTTCCAATCCACTCACAATATTCAGGTCCGNCAAGTGTAGACA
CAGAGCGG
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