FC875678

Overview
NameFC875678
Unique NameFC875678
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC8_HUMAN (Probable palmitoyltransferase ZDHHC8 OS=Homo sapiens GN=ZDHHC8 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 40/110 (36.36%), Postives = 52/110 (47.27%), Query Frame = 2
Query:  368 ILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            I+ + ++ ++ M  F DPG  P                + E    +    NV  D RG    + +C  C   +PPRC HCSVC  CV   DHHC WV NC+G RNY  FF
Sbjct:   53 IIFLFVLANFSMATFMDPGVFPR----------ADEDEDKEDDFRAPLYKNV--DVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVEDFDHHCPWVNNCIGRRNYRYFF 150          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC8_CANFA (Probable palmitoyltransferase ZDHHC8 OS=Canis familiaris GN=ZDHHC8 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 40/110 (36.36%), Postives = 52/110 (47.27%), Query Frame = 2
Query:  368 ILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            I+ + ++ ++ M  F DPG  P                + E    +    NV  D RG    + +C  C   +PPRC HCSVC  CV   DHHC WV NC+G RNY  FF
Sbjct:   53 IIFLFVLANFSMATFMDPGVFPR----------ADEDEDKEDDFRAPLYKNV--DVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVEDFDHHCPWVNNCIGRRNYRYFF 150          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC7_HUMAN (Palmitoyltransferase ZDHHC7 OS=Homo sapiens GN=ZDHHC7 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 38/121 (31.40%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  338 FGFSII--ILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            F +S++  ++F+ L V+ + S++  +  DPG+VP+                     + + ++++      P   +  C +C   KP R HHCS+C+RC+ KMDHHC WV NCVG +N   F
Sbjct:   76 FWYSVVNGVIFNCLAVLALSSHLRTMLTDPGAVPKG------------------NATKEYMESL---QLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFF 175          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDH13_ARATH (Probable S-acyltransferase At3g56930 OS=Arabidopsis thaliana GN=At3g56930 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 40/121 (33.06%), Postives = 58/121 (47.93%), Query Frame = 2
Query:  350 IIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDAR-----GPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            I+ +  IL ++ ++  +M    DPG VP ++R                  S ++ +   P  +     G +  V FCD C   +PPR  HCS+C  CV + DHHC WV  C+G RNY  FF
Sbjct:   72 ILCVSWILTILDIFFLLMTSSRDPGIVPRSFRPPETDDAPDSTTPSMEWVSGRTPNIRIPRVKDVTVNGHTVKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGVRNYRFFF 192          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC3_HUMAN (Palmitoyltransferase ZDHHC3 OS=Homo sapiens GN=ZDHHC3 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 2
Query:  344 FSII--ILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            +SII  I+F++L  + + S+   +  DPG+VP+                     + + ++++      P + V  C +C + KP R HHCSVC+RC+ KMDHHC WV NCVG  N   F
Sbjct:   75 YSIINGIVFNLLAFLALASHCRAMLTDPGAVPKG------------------NATKEFIESL---QLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYF 172          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ERFB_GIBZE (Palmitoyltransferase ERF2 OS=Gibberella zeae GN=ERF2 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 43/133 (32.33%), Postives = 56/133 (42.11%), Query Frame = 2
Query:  335 FFGF-----------SIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSR-SVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            FFGF           +I I+F  L  +   S++     DPG +P N             + L   T+  +L              V  C  C   +PPR HHC +C  C+   DHHCVW+ NCVG RNY  FF
Sbjct:  382 FFGFEAPWLWNNVSPAIPIVFAYLAYICFSSFIHASVTDPGILPRNLHQFPPVDDDDDPLQLSPPTTDWALIKSAESTTAAMEVPVKHCRTCNIWRPPRAHHCRLCDNCIETHDHHCVWLNNCVGKRNYRYFF 514          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: PFA4_DEBHA (Palmitoyltransferase PFA4 OS=Debaryomyces hansenii GN=PFA4 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 39/113 (34.51%), Postives = 53/113 (46.90%), Query Frame = 2
Query:  356 ILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            IL+ + + ++  SY + +  DPGS P+N+               +AG   +                 +C +CQN KP R HHC  C +CVLKMDHHC W  NCVG  N   F
Sbjct:   41 ILYEVYVCIVWLSYYLAIVVDPGSPPKNFTP-------------KAGEWRR-----------------WCKKCQNYKPERSHHCKTCNKCVLKMDHHCPWTYNCVGHNNLPHF 123          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDH18_RAT (Palmitoyltransferase ZDHHC18 OS=Rattus norvegicus GN=Zdhhc18 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 43/129 (33.33%), Postives = 58/129 (44.96%), Query Frame = 2
Query:  347 SIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDA-RGPSRS-----------VGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            +I I+  IL   ++   +   F DPG +P                  EA    + +DN G    R P R+           + +C  C+  +PPR  HCSVC  CV + DHHC WV NCVG RNY  F+
Sbjct:  121 AIPIIAAILFFFVMSCLLQTSFTDPGILPR-------------ATICEAAALEKQIDNTGSSTYRPPPRTREVMINGQMVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFY 236          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDH18_MOUSE (Palmitoyltransferase ZDHHC18 OS=Mus musculus GN=Zdhhc18 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 43/129 (33.33%), Postives = 58/129 (44.96%), Query Frame = 2
Query:  347 SIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDA-RGPSRS-----------VGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            +I I+  IL   ++   +   F DPG +P                  EA    + +DN G    R P R+           + +C  C+  +PPR  HCSVC  CV + DHHC WV NCVG RNY  F+
Sbjct:  115 AIPIIAAILFFFVMSCLLQTSFTDPGILPR-------------ATICEAAALEKQIDNTGSSTYRPPPRTREVMINGQTVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFY 230          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDH18_HUMAN (Palmitoyltransferase ZDHHC18 OS=Homo sapiens GN=ZDHHC18 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 43/129 (33.33%), Postives = 58/129 (44.96%), Query Frame = 2
Query:  347 SIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDA-RGPSRS-----------VGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            +I I+  IL   ++   +   F DPG +P                  EA    + +DN G    R P R+           + +C  C+  +PPR  HCSVC  CV + DHHC WV NCVG RNY  F+
Sbjct:  123 AIPIIAAILFFFVMSCLLQTSFTDPGILPR-------------ATVCEAAALEKQIDNTGSSTYRPPPRTREVLINGQMVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFY 238          
The following BLAST results are available for this feature:
BLAST of FC875678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
ZDHC8_HUMAN1.066e-1336.36Probable palmitoyltransferase ZDHHC8 OS=Homo sapie... [more]
ZDHC8_CANFA1.066e-1336.36Probable palmitoyltransferase ZDHHC8 OS=Canis fami... [more]
ZDHC7_HUMAN1.066e-1331.40Palmitoyltransferase ZDHHC7 OS=Homo sapiens GN=ZDH... [more]
ZDH13_ARATH1.066e-1333.06Probable S-acyltransferase At3g56930 OS=Arabidopsi... [more]
ZDHC3_HUMAN1.392e-1334.45Palmitoyltransferase ZDHHC3 OS=Homo sapiens GN=ZDH... [more]
ERFB_GIBZE1.392e-1332.33Palmitoyltransferase ERF2 OS=Gibberella zeae GN=ER... [more]
PFA4_DEBHA2.375e-1334.51Palmitoyltransferase PFA4 OS=Debaryomyces hansenii... [more]
ZDH18_RAT3.102e-1333.33Palmitoyltransferase ZDHHC18 OS=Rattus norvegicus ... [more]
ZDH18_MOUSE3.102e-1333.33Palmitoyltransferase ZDHHC18 OS=Mus musculus GN=Zd... [more]
ZDH18_HUMAN3.102e-1333.33Palmitoyltransferase ZDHHC18 OS=Homo sapiens GN=ZD... [more]

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Properties
Property NameValue
Genbank descriptionC31401F03EF CTVClemen1 Citrus clementina cDNA clone C31401F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875678 ID=FC875678; Name=FC875678; organism=Citrus clementina; type=EST; length=700bp
GGTGCTCTGTTCCCAGTACAAACTAATCTCGAACTGTGCCCTAATTTCTC
TTCTGAATTAAAGTTACCGGGACACATCAACTCCAGGCAAGAACAGGTAA
AACCTGGCTTCGGATATCTGGAAACGCCTGTTCCCACCGCGATCCAGAAG
ATACCAACCAATCATCCCCGAAATCAACTTGGGCATGGACATAAACCTTT
TCAAGCTCTGTTCCGGCCTCAAAGTGCTGGGCTACTTCATGATCCTGCTA
GTGGCCGCAATTATCGCTGTGTCGTACTACGCCGTCGTTGTAATTACCTG
TGGCCCACAGTTGCTTCGCGGCGGAGTCCACTCTTTTTTTGGGTTCTCAA
TAATTATTCTATTCCATATTCTGCTTGTAATGTTGGTATGGAGCTATGTT
ATGGTAGTGTTTTGGGACCCTGGTTCTGTGCCTGAAAATTGGAGGTCAGT
TTCAGTATCATCATCATCATCATCGGGGGTGAATTTAGAGGCTGGTACTT
CTTCTCAATCATTAGATAACGTGGGACCGGATGCACGGGGTCCTTCACGG
TCGGTAGGCTTCTGTGATCGATGCCAAAATGGGAAGCCTCCCCGTTGCCA
TCATTGTTCTGTTTGTCAAAGATGTGTTCTTAAGATGGATCACCACTGTG
TTTGGGTGGTGAATTGTGTTGGAGCGCGCAACTACAGTCTTTTCTTCTTT
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