FC875678

Overview
NameFC875678
Unique NameFC875678
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDH12_ARATH (Probable S-acyltransferase At3g56920 OS=Arabidopsis thaliana GN=At3g56920 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 42/127 (33.07%), Postives = 60/127 (47.24%), Query Frame = 2
Query:  329 HSFFGFSIIILFHILLVMLVWSYVMVVFW-DPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPD----ARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            H FF  S+ ++  ILL  + ++++ +    DPG +P N +            + E  TS      +         G +  V FCD CQ  +PPR  HCS+C  CV + DHHC WV  C+  RNY  F
Sbjct:   62 HPFF-HSLTLIGAILLTFMAFTFLFLTSSRDPGIIPRNKQVSEAEIPDVTTQSTEWVTSKLGSVKLPRTKDVMVNGFTVKVKFCDTCQLYRPPRAFHCSICNNCVQRFDHHCPWVGQCIALRNYPFF 187          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ERFB_KLULA (Palmitoyltransferase ERF2 OS=Kluyveromyces lactis GN=ERF2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 40/118 (33.90%), Postives = 58/118 (49.15%), Query Frame = 2
Query:  347 SIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVG--FCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            +I+IL++  L + + S++     DPG VP N             +N       +  +      + P+ SV   +C  C+  +PPR  HCSVC  CVL  DHHC W+ NC+G RNY  F
Sbjct:  109 AIVILYYFYL-LTICSFLRAACSDPGIVPRN--------VHIPDLNASYKIPQEYYNYAILPTKNPNASVSMKYCQTCRIWRPPRSAHCSVCDVCVLSHDHHCKWLNNCIGKRNYRFF 217          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC6_PONAB (Probable palmitoyltransferase ZDHHC6 OS=Pongo abelii GN=ZDHHC6 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 38/123 (30.89%), Postives = 56/123 (45.53%), Query Frame = 2
Query:  326 VHSFFGFSIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            +H+  G    I+     VM++++Y   +F  PG VP  W+                           P+    +  + +C  CQ  K PR HHC  C RCV+KMDHHC W+ NC G +N++ F
Sbjct:   49 LHTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWK---------------------------PEISQDTMYLQYCKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASF 144          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC6_HUMAN (Probable palmitoyltransferase ZDHHC6 OS=Homo sapiens GN=ZDHHC6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 38/123 (30.89%), Postives = 56/123 (45.53%), Query Frame = 2
Query:  326 VHSFFGFSIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            +H+  G    I+     VM++++Y   +F  PG VP  W+                           P+    +  + +C  CQ  K PR HHC  C RCV+KMDHHC W+ NC G +N++ F
Sbjct:   49 LHTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWK---------------------------PEISQDTMYLQYCKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASF 144          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC6_BOVIN (Probable palmitoyltransferase ZDHHC6 OS=Bos taurus GN=ZDHHC6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 39/123 (31.71%), Postives = 56/123 (45.53%), Query Frame = 2
Query:  326 VHSFFGFSIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            +H+  G    I+     VM++++Y   +F  PG VP  W+                           P+    S  + +C  CQ  K PR HHC  C RCV+KMDHHC W+ NC G +N++ F
Sbjct:   49 LHTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWK---------------------------PENSQDSVYLQYCKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASF 144          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ERFB_NEUCR (Palmitoyltransferase ERF2 OS=Neurospora crassa GN=erf-2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13
Identity = 41/122 (33.61%), Postives = 57/122 (46.72%), Query Frame = 2
Query:  347 SIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRS-----VGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            +I + F  L  + V S++     DPG +P N                ++ T   + D V   +   S +     + +C  CQ  +PPR HHC +C  CV   DHHCVW+ NCVG RNY  FF
Sbjct:  388 AIPVTFAYLAYICVSSFLHASASDPGILPRNLHKFPPPEME------DSPTGPPTTDWVLVHSAEASTAAMEVPIKYCKTCQLWRPPRAHHCRLCDNCVETQDHHCVWLNNCVGRRNYRYFF 503          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: PFA3_KLULA (Palmitoyltransferase PFA3 OS=Kluyveromyces lactis GN=PFA3 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12
Identity = 28/48 (58.33%), Postives = 31/48 (64.58%), Query Frame = 2
Query:  551 SVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            S  FC  C+  KP RCHHCS C +C LKMDHHC W  +CVG RN   F
Sbjct:  101 SFRFCQTCEIWKPDRCHHCSKCNKCFLKMDHHCPWFASCVGFRNQKFF 148          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ERFB_YEAST (Palmitoyltransferase ERF2 OS=Saccharomyces cerevisiae GN=ERF2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12
Identity = 35/123 (28.46%), Postives = 59/123 (47.97%), Query Frame = 2
Query:  329 HSFFGFSIIILF-HILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            H+  G+ ++++F +   V+ + S++     DPG +P N                    +  +  ++  D      ++ +C  C+  +PPR  HCS C  CV+  DHHC+WV NC+G RNY  F
Sbjct:  101 HTQNGYKVLVIFFYYFWVITLASFIRTATSDPGVLPRNIHLSQLRNNYQIPQEYYNLITLPTHSSISKDI-----TIKYCPSCRIWRPPRSSHCSTCNVCVMVHDHHCIWVNNCIGKRNYRFF 218          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC5_PONAB (Probable palmitoyltransferase ZDHHC5 OS=Pongo abelii GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  530 DARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            + +G    + +C  C+  +PPRC HCSVC  CV + DHHC WV NC+G RNY  FF
Sbjct:   95 EIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFF 150          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC5_PANTR (Probable palmitoyltransferase ZDHHC5 OS=Pan troglodytes GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  530 DARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            + +G    + +C  C+  +PPRC HCSVC  CV + DHHC WV NC+G RNY  FF
Sbjct:   95 EIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFF 150          
The following BLAST results are available for this feature:
BLAST of FC875678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
ZDH12_ARATH3.102e-1333.07Probable S-acyltransferase At3g56920 OS=Arabidopsi... [more]
ERFB_KLULA3.102e-1333.90Palmitoyltransferase ERF2 OS=Kluyveromyces lactis ... [more]
ZDHC6_PONAB4.051e-1330.89Probable palmitoyltransferase ZDHHC6 OS=Pongo abel... [more]
ZDHC6_HUMAN4.051e-1330.89Probable palmitoyltransferase ZDHHC6 OS=Homo sapie... [more]
ZDHC6_BOVIN4.051e-1331.71Probable palmitoyltransferase ZDHHC6 OS=Bos taurus... [more]
ERFB_NEUCR6.910e-1333.61Palmitoyltransferase ERF2 OS=Neurospora crassa GN=... [more]
PFA3_KLULA1.179e-1258.33Palmitoyltransferase PFA3 OS=Kluyveromyces lactis ... [more]
ERFB_YEAST1.179e-1228.46Palmitoyltransferase ERF2 OS=Saccharomyces cerevis... [more]
ZDHC5_PONAB1.539e-1250.00Probable palmitoyltransferase ZDHHC5 OS=Pongo abel... [more]
ZDHC5_PANTR1.539e-1250.00Probable palmitoyltransferase ZDHHC5 OS=Pan troglo... [more]

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Properties
Property NameValue
Genbank descriptionC31401F03EF CTVClemen1 Citrus clementina cDNA clone C31401F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875678 ID=FC875678; Name=FC875678; organism=Citrus clementina; type=EST; length=700bp
GGTGCTCTGTTCCCAGTACAAACTAATCTCGAACTGTGCCCTAATTTCTC
TTCTGAATTAAAGTTACCGGGACACATCAACTCCAGGCAAGAACAGGTAA
AACCTGGCTTCGGATATCTGGAAACGCCTGTTCCCACCGCGATCCAGAAG
ATACCAACCAATCATCCCCGAAATCAACTTGGGCATGGACATAAACCTTT
TCAAGCTCTGTTCCGGCCTCAAAGTGCTGGGCTACTTCATGATCCTGCTA
GTGGCCGCAATTATCGCTGTGTCGTACTACGCCGTCGTTGTAATTACCTG
TGGCCCACAGTTGCTTCGCGGCGGAGTCCACTCTTTTTTTGGGTTCTCAA
TAATTATTCTATTCCATATTCTGCTTGTAATGTTGGTATGGAGCTATGTT
ATGGTAGTGTTTTGGGACCCTGGTTCTGTGCCTGAAAATTGGAGGTCAGT
TTCAGTATCATCATCATCATCATCGGGGGTGAATTTAGAGGCTGGTACTT
CTTCTCAATCATTAGATAACGTGGGACCGGATGCACGGGGTCCTTCACGG
TCGGTAGGCTTCTGTGATCGATGCCAAAATGGGAAGCCTCCCCGTTGCCA
TCATTGTTCTGTTTGTCAAAGATGTGTTCTTAAGATGGATCACCACTGTG
TTTGGGTGGTGAATTGTGTTGGAGCGCGCAACTACAGTCTTTTCTTCTTT
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