FC875678

Overview
NameFC875678
Unique NameFC875678
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC5_MOUSE (Probable palmitoyltransferase ZDHHC5 OS=Mus musculus GN=Zdhhc5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  530 DARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            + +G    + +C  C+  +PPRC HCSVC  CV + DHHC WV NC+G RNY  FF
Sbjct:   95 EIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFF 150          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC5_HUMAN (Probable palmitoyltransferase ZDHHC5 OS=Homo sapiens GN=ZDHHC5 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  530 DARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            + +G    + +C  C+  +PPRC HCSVC  CV + DHHC WV NC+G RNY  FF
Sbjct:   95 EIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFF 150          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC5_CANFA (Probable palmitoyltransferase ZDHHC5 OS=Canis familiaris GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  530 DARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            + +G    + +C  C+  +PPRC HCSVC  CV + DHHC WV NC+G RNY  FF
Sbjct:   95 EIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFF 150          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDH10_ARATH (Probable S-acyltransferase At3g48760 OS=Arabidopsis thaliana GN=At3g48760 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 37/120 (30.83%), Postives = 55/120 (45.83%), Query Frame = 2
Query:  341 GFSIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPD-ARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLFF 697
            G S++ +   L+++ +   ++    DPG +P N            G    A T    L         G +  + +CD C   +PPR  HCS+C  CV K DHHC W+  C+G RNY  +F
Sbjct:   85 GVSVLAVAVGLILLDLVFLLLTSARDPGIIPRNLYPPEPESNEGNGEPRLAHTPQSRLPRTKDMIVNGITVKIKYCDTCMLYRPPRASHCSICNNCVEKFDHHCPWLGQCIGLRNYRFYF 204          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: PFA4_YEAST (Palmitoyltransferase PFA4 OS=Saccharomyces cerevisiae GN=PFA4 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 2
Query:  560 FCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            FC +CQ+ KP R HHC  C +CVL MDHHC W +NCVG  NY  F
Sbjct:   79 FCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHF 123          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: PFA4_ASPFU (Palmitoyltransferase pfa4 OS=Aspergillus fumigatus GN=pfa4 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 36/109 (33.03%), Postives = 49/109 (44.95%), Query Frame = 2
Query:  371 LLVMLVW-SYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            +  + +W  Y      DPG +P++W                   +  +L  +  D  G  +   +C RC+  KPPR HHC  CQRC+ KMDHHC W  NCV    Y  F
Sbjct:   49 IFAVCIWVCYYRACTVDPGRIPKDW-------------------TPPNLKQLEKDCAGGRQR--WCRRCEAFKPPRAHHCKTCQRCIPKMDHHCPWTSNCVSHFTYPHF 136          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: PFA3_DEBHA (Palmitoyltransferase PFA3 OS=Debaryomyces hansenii GN=PFA3 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 27/48 (56.25%), Postives = 31/48 (64.58%), Query Frame = 2
Query:  551 SVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            S  +C +C   KP RCHHCS C RCVL+MDHHC W   CVG  N+  F
Sbjct:  165 SYRYCTKCSVWKPDRCHHCSTCNRCVLRMDHHCPWFAMCVGFYNHKFF 212          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: PFA3_CANGA (Palmitoyltransferase PFA3 OS=Candida glabrata GN=PFA3 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 43/146 (29.45%), Postives = 66/146 (45.21%), Query Frame = 2
Query:  305 PQLLRGGVHSFFGFSIIILFHILLVMLV------------WSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSL--DNVGPDARGPSRSVGF--CDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            P+ L  G++ +  ++I++  H++   +V            ++Y  +++  PG+  E               +L A  S   L  + +   +    R+  F  C  C + KP RCHHCS C  CVLKMDHHC W   CVG RN   F
Sbjct:   12 PRCLTTGLYLWSLYAIVVCIHVIRARVVLPLVFTIAMVALYTYAKLIYVGPGTTKE--------YSILRVYDLNAAESGFELPPEMLVKRSYTQKRNGRFRVCKSCSSWKPDRCHHCSTCNVCVLKMDHHCPWFAGCVGYRNQKFF 149          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: ZDHC4_ARATH (Probable S-acyltransferase At2g40990 OS=Arabidopsis thaliana GN=At2g40990 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 40/126 (31.75%), Postives = 61/126 (48.41%), Query Frame = 2
Query:  347 SIIILFHILLVMLVWSYVMVVFW-DPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPD---------ARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            S+I+L  +LL +L ++++ +    DPG +P N            G+++   +S    + +G             G +  V FCD C   +PPR  HCS+C  CV + DHHC WV  C+  RNY  F
Sbjct:   60 SLILLGALLLTVLDFTFLFLTSSRDPGIIPRN-----KEAPEAEGLDMITQSSEWVNNKLGNTKIPRTKDILVNGYTVKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIALRNYPYF 180          
BLAST of FC875678 vs. ExPASy Swiss-Prot
Match: PFA3_ASHGO (Palmitoyltransferase PFA3 OS=Ashbya gossypii GN=PFA3 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 34/108 (31.48%), Postives = 53/108 (49.07%), Query Frame = 2
Query:  371 LLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYSLF 694
            L+ +++++Y   +   PGS P ++              +E      +   V  D+ G  R   +C +C+  KP RCHHCS C +C L+ DHHCVW   C+G  N+  F
Sbjct:   46 LVPLILYAYFSTIAVGPGS-PLDFEELRIRDLNDVETGMEFPPDFLAAKTVTLDSTGRHR---YCVKCKVWKPDRCHHCSACDKCYLRRDHHCVWFPGCIGYNNHKFF 149          
The following BLAST results are available for this feature:
BLAST of FC875678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
ZDHC5_MOUSE1.539e-1250.00Probable palmitoyltransferase ZDHHC5 OS=Mus muscul... [more]
ZDHC5_HUMAN1.539e-1250.00Probable palmitoyltransferase ZDHHC5 OS=Homo sapie... [more]
ZDHC5_CANFA1.539e-1250.00Probable palmitoyltransferase ZDHHC5 OS=Canis fami... [more]
ZDH10_ARATH1.539e-1230.83Probable S-acyltransferase At3g48760 OS=Arabidopsi... [more]
PFA4_YEAST2.010e-1260.00Palmitoyltransferase PFA4 OS=Saccharomyces cerevis... [more]
PFA4_ASPFU2.626e-1233.03Palmitoyltransferase pfa4 OS=Aspergillus fumigatus... [more]
PFA3_DEBHA2.626e-1256.25Palmitoyltransferase PFA3 OS=Debaryomyces hansenii... [more]
PFA3_CANGA2.626e-1229.45Palmitoyltransferase PFA3 OS=Candida glabrata GN=P... [more]
ZDHC4_ARATH3.429e-1231.75Probable S-acyltransferase At2g40990 OS=Arabidopsi... [more]
PFA3_ASHGO3.429e-1231.48Palmitoyltransferase PFA3 OS=Ashbya gossypii GN=PF... [more]

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Properties
Property NameValue
Genbank descriptionC31401F03EF CTVClemen1 Citrus clementina cDNA clone C31401F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875678 ID=FC875678; Name=FC875678; organism=Citrus clementina; type=EST; length=700bp
GGTGCTCTGTTCCCAGTACAAACTAATCTCGAACTGTGCCCTAATTTCTC
TTCTGAATTAAAGTTACCGGGACACATCAACTCCAGGCAAGAACAGGTAA
AACCTGGCTTCGGATATCTGGAAACGCCTGTTCCCACCGCGATCCAGAAG
ATACCAACCAATCATCCCCGAAATCAACTTGGGCATGGACATAAACCTTT
TCAAGCTCTGTTCCGGCCTCAAAGTGCTGGGCTACTTCATGATCCTGCTA
GTGGCCGCAATTATCGCTGTGTCGTACTACGCCGTCGTTGTAATTACCTG
TGGCCCACAGTTGCTTCGCGGCGGAGTCCACTCTTTTTTTGGGTTCTCAA
TAATTATTCTATTCCATATTCTGCTTGTAATGTTGGTATGGAGCTATGTT
ATGGTAGTGTTTTGGGACCCTGGTTCTGTGCCTGAAAATTGGAGGTCAGT
TTCAGTATCATCATCATCATCATCGGGGGTGAATTTAGAGGCTGGTACTT
CTTCTCAATCATTAGATAACGTGGGACCGGATGCACGGGGTCCTTCACGG
TCGGTAGGCTTCTGTGATCGATGCCAAAATGGGAAGCCTCCCCGTTGCCA
TCATTGTTCTGTTTGTCAAAGATGTGTTCTTAAGATGGATCACCACTGTG
TTTGGGTGGTGAATTGTGTTGGAGCGCGCAACTACAGTCTTTTCTTCTTT
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