FC875681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 9.677e-49 Identity = 61/122 (50.00%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 105 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF Sbjct: 17 SAEQCGSQAGGALCAPGLCCSKFGWCGNTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAF 127 HSP 2 Score: 99.3673 bits (246), Expect = 9.677e-49 Identity = 50/93 (53.76%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ F AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C NNPD + Sbjct: 121 KREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLV 210
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.679e-49 Identity = 61/123 (49.59%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 105 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFF Sbjct: 17 SAEQCGSQAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQC-------------PGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFF 126 HSP 2 Score: 98.5969 bits (244), Expect = 9.679e-49 Identity = 50/93 (53.76%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ FFAQT HETTGGW AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C NNPD + Sbjct: 119 KREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQG-SPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLV 208
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.261e-48 Identity = 61/123 (49.59%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 105 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDG-GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 SA CG G CP G CCS FGWCG T DYC G CQS C P T G G++ IIS MF+ +L++RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFF Sbjct: 22 SAEQCGKQAGGARCPSGMCCSNFGWCGNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFF 144 HSP 2 Score: 94.7449 bits (234), Expect = 1.261e-48 Identity = 49/93 (52.69%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ FFAQT HETTGGW AP G YAWGYC+ RE G S YC +PC KYYGRGPIQ+S+NYNY C NNPD + Sbjct: 137 KREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPC--GRAIGQNLLNNPDLV 226
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.640e-48 Identity = 59/122 (48.36%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 105 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 SA CGS G +C G CCS+FGWCG T +YC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF Sbjct: 21 SAEQCGSQAGGALCASGLCCSKFGWCGNTNEYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAF 131 HSP 2 Score: 98.9821 bits (245), Expect = 3.640e-48 Identity = 50/93 (53.76%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ F AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C NNPD + Sbjct: 125 KREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLV 214
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 6.184e-48 Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 117 CGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECD--PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 CGS G +CP CCS++GWCG T+DYC GCQS C+ G C P ++G G + IIS +F+ +L +RND+ C A+ FYTYDAF+ AA A+P F +G+ KRE+AAF Sbjct: 21 CGSQAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCS----GGCGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAF 134 HSP 2 Score: 95.9005 bits (237), Expect = 6.184e-48 Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD--PNYPCRG--KYYGRGPIQLSWNYNY 642 K ++ F AQT HETTGGWP AP G Y+WGYCF E + YC+ P +PC KYYGRGPIQ+++NYNY Sbjct: 128 KREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY 200
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.369e-47 Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 108 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 A CGS G VCP G CCS+FG+CG T YC +GCQS C P T G G++G+++ +F+ +L+YRND RC FYTYDAFI AA++F FG +G++ +K+E+AAF Sbjct: 23 AEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKSSPTPTI-PTPSTGG--GDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAF 138 HSP 2 Score: 92.0485 bits (227), Expect = 1.369e-47 Identity = 49/92 (53.26%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP-NYPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K++L F AQT HETTGGWP AP G YAWGYCF E YC P ++PC KYYGRGPIQL+ NYNY NNPD L Sbjct: 132 KKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQN-TQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLL 220
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 117.857 bits (294), Expect = 1.784e-47 Identity = 60/119 (50.42%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 108 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 A CGS G CP CCSRFGWCG +T YC +GCQS C+ G P T GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AF FG +G RKRE+AAF Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCG-STPYCGDGCQSQCSGCGGGST-PVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAF 135 HSP 2 Score: 93.2041 bits (230), Expect = 1.784e-47 Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNY 642 K ++ F AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YYGRGPIQLS NYNY Sbjct: 129 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY 200
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 5.321e-40 Identity = 69/125 (55.20%), Postives = 81/125 (64.80%), Query Frame = 3 Query: 102 GSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGE----LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 GSA CG +CPGG CCS +GWCG T DYC +GCQS C+ G G G GG L II MF+D+L+YRND +CPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF Sbjct: 19 GSAEQCGQQAGDALCPGGLCCSSYGWCGTTADYCGDGCQSQCDGGGGGGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAF 143 HSP 2 Score: 46.9802 bits (110), Expect = 5.321e-40 Identity = 20/44 (45.45%), Postives = 23/44 (52.27%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYC-FNREVGAASSD 564 K ++ F QT HET G WP A G +Y WGYC N G D Sbjct: 137 KREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHMNYNYGLCGDD 180
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.526e-39 Identity = 49/76 (64.47%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRC 651 K +L F QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC GK YYGRGP+QLSWNYNY C Sbjct: 54 KRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPC 128 HSP 2 Score: 80.8777 bits (198), Expect = 7.526e-39 Identity = 35/57 (61.40%), Postives = 48/57 (84.21%), Query Frame = 3 Query: 285 KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAF 60
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.661e-38 Identity = 59/122 (48.36%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 111 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 G G CP CCSR+GWCGLT DYC GCQS C V + DD TA GG G +++ FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF Sbjct: 36 GRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155 HSP 2 Score: 67.781 bits (164), Expect = 3.661e-38 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNY 642 K ++ F AQT H T+GG Y+WGYC+ +EV A+SD+C PN +PC GK Y+ RGP+Q+++NYNY Sbjct: 149 KREVAAFLAQTSHATSGG-------PYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY 213 The following BLAST results are available for this feature:
BLAST of FC875681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875681 ID=FC875681; Name=FC875681; organism=Citrus clementina; type=EST; length=712bpback to top |