FC875681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.977e-25 Identity = 45/117 (38.46%), Postives = 58/117 (49.57%), Query Frame = 3 Query: 114 NCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAG--DGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 NCG C CCS+FG+CG T YC GC+S G C GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA F Sbjct: 26 NCG----CAPNLCCSQFGYCGSTDAYCGTGCRS-------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMF 126 HSP 2 Score: 61.2326 bits (147), Expect = 1.977e-25 Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 1 Query: 526 YCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRC 651 +C+ E+ AS DYCD N YPC GK Y+GRGPIQLSWNYNY C Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC 182
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.572e-25 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 105 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 +A +CG C +CCS++G+CG +DYC GCQ+ P D A + + I++ + F L+ +D C A+ FYT DAF+ AA +P+FG +G+ KREIAAFF Sbjct: 24 AAQSCG----CASDQCCSKWGFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126 HSP 2 Score: 55.0694 bits (131), Expect = 2.572e-25 Identity = 29/74 (39.19%), Postives = 39/74 (52.70%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYNY 642 K ++ FFA HET +C+ E+ S +YCD +PC GK YYGRGP+Q+SWN+NY Sbjct: 119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY 179
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.367e-25 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 276 ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 ++G I++ +F ++L+ RND RCPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF Sbjct: 18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 78 HSP 2 Score: 53.5286 bits (127), Expect = 4.367e-25 Identity = 31/69 (44.93%), Postives = 37/69 (53.62%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 642 K+++ FF QT HETTGG A G +A GYCF RE S +YGRGPIQL+ NY Sbjct: 71 KKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSG-----------FYGRGPIQLTGQSNY 127
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.249e-24 Identity = 46/119 (38.66%), Postives = 59/119 (49.58%), Query Frame = 3 Query: 105 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 +A NCG C CCS+FG+CG T YC +GCQS C G G G GG + F + ++ + C + FYT AF+ A A+P F + G E KREIAAFF Sbjct: 24 AAQNCG----CQPNFCCSKFGYCGTTDAYCGDGCQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138 HSP 2 Score: 52.373 bits (124), Expect = 1.249e-24 Identity = 28/74 (37.84%), Postives = 40/74 (54.05%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNY 642 K ++ FFA HET +C+ E+ +++ YCD + +PC KYYGRGP+Q+SWNYNY Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNA-YCDASNRQWPCAAGQKYYGRGPLQISWNYNY 190
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.760e-24 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 3 Query: 279 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 +G I++ +F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 85 HSP 2 Score: 57.3806 bits (137), Expect = 2.760e-24 Identity = 32/69 (46.38%), Postives = 38/69 (55.07%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 642 K+++ FF QT HETTGG +P G YA GYCF RE + YYGRGPIQL+ NY Sbjct: 78 KKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-----------YYGRGPIQLTGQSNY 134
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.916e-24 Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 3 Query: 279 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG SG++T R++EIAAFF Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFF 86 HSP 2 Score: 50.0618 bits (118), Expect = 7.916e-24 Identity = 33/89 (37.08%), Postives = 44/89 (49.44%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 ++++ FF QT HETTGG A + GYCF R+ +D D +YYGRGPIQL+ NY + NNPD + Sbjct: 79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNQNNYEKA--GNAIRQDLVNNPDLV 151
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.027e-23 Identity = 42/122 (34.43%), Postives = 59/122 (48.36%), Query Frame = 3 Query: 105 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELG---KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 SA NCG C CCS++G+CG DYC +GC+S C G G G GG G + + + F + ++ + C + FYT +F+ AA ++ F KREIAAFF Sbjct: 28 SAQNCG----CQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFF 145 HSP 2 Score: 62.003 bits (149), Expect = 1.027e-23 Identity = 32/74 (43.24%), Postives = 40/74 (54.05%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNY 642 K ++ FFA HET C+ E+ AS DYCD N +PC+ KYYGRGP+Q+SWNYNY Sbjct: 138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY 198
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.027e-23 Identity = 42/123 (34.15%), Postives = 62/123 (50.41%), Query Frame = 3 Query: 105 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQS-----NCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 +A NCG C G CCS++G+CG T YC +GCQS + + G G AG G + +++ F ++ + C + FYT +F+ AA+++ F N KREIAAFF Sbjct: 26 AAQNCG----CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNG-IKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142 HSP 2 Score: 57.3806 bits (137), Expect = 1.027e-23 Identity = 29/74 (39.19%), Postives = 40/74 (54.05%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNY 642 K ++ FFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q+SWN+NY Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY 195
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.339e-23 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 255 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFF 458 G A G +G +I++ +F +L R++ +CPAR FYTYDAFI AA +FPAFG SG + +RE+AAFF Sbjct: 26 GAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFF 92 HSP 2 Score: 60.4622 bits (145), Expect = 1.339e-23 Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 1 Query: 433 VKEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 642 ++ +L FF QT HETTGG ++ WGYCF E+ A+S YYGRGPIQL+ NY Sbjct: 84 IRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP----------PYYGRGPIQLTGQSNY 142
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIC_POPTR (Acidic endochitinase WIN6.2C (Fragment) OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23 Identity = 57/105 (54.29%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 102 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAF 398 GSA CG +CPGG CCS +GWCG T DYC +GCQS C+ G+ CD G GDG G L II + F+ LL++RND RC A FYTYDAFI AAK F Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSFYGWCGTTVDYCGDGCQSQCDG---GDGCDGGGGGGGDGDDGYLSDIIPKSTFDALLKFRNDPRCHAVGFYTYDAFISAAKEF 121 The following BLAST results are available for this feature:
BLAST of FC875681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875681 ID=FC875681; Name=FC875681; organism=Citrus clementina; type=EST; length=712bpback to top |