FC875681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.270e-23 Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 3 Query: 279 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG +G++T R++EIAAFF Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFF 86 HSP 2 Score: 50.0618 bits (118), Expect = 2.270e-23 Identity = 33/89 (37.08%), Postives = 44/89 (49.44%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 ++++ FF QT HETTGG A + GYCF R+ +D D +YYGRGPIQL+ NY + NNPD + Sbjct: 79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNRNNYEKA--GTAIGQELVNNPDLV 151
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 3.810e-23 Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 117 CGSGV---VCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 CG+ V C CCS GWCG DYC CQ C+ V G G + +++ +F+ + +R D CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF Sbjct: 72 CGAAVGNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAF 186 HSP 2 Score: 45.4394 bits (106), Expect = 3.810e-23 Identity = 25/72 (34.72%), Postives = 35/72 (48.61%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLSWNYNY 642 K ++ F A T+G D +AWG C +D+C ++PC KY RGPIQL+ N+NY Sbjct: 180 KREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY 250
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.441e-23 Identity = 48/127 (37.80%), Postives = 59/127 (46.46%), Query Frame = 3 Query: 108 AGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDP----------DDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 A NCG C CCS FG+CG T YC G NC C P GT G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFF Sbjct: 27 AQNCG----CAPNLCCSNFGFCGTGTPYCGVG---NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFF 143 HSP 2 Score: 53.5286 bits (127), Expect = 8.441e-23 Identity = 32/76 (42.11%), Postives = 36/76 (47.37%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREV-GAASSDYCDPN----YPCRG--KYYGRGPIQLSWNYNY 642 K ++ FFA HETT C E G YCD + YPC KYYGRGP+QLSWNYNY Sbjct: 136 KREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY 198
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.423e-22 Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 3 Query: 105 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 SA NCG C G CCS++G+CG DYC GCQ Q C P + I++ +++ + D C + FYT DAF+ A ++ FG G+E KREIAA F Sbjct: 22 SAQNCG----CAEGLCCSQYGYCGTGEDYCGTGCQ----QGPCTTASPPPSNNVNAD----ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126 HSP 2 Score: 55.0694 bits (131), Expect = 2.423e-22 Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 1 Query: 526 YCFNREVGAASSDYCDPN----YPCRGK--YYGRGPIQLSWNYNY 642 +C+ E+ AS DYCD YPC Y+GRGPIQLSWN+NY Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY 180
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.388e-21 Identity = 42/104 (40.38%), Postives = 55/104 (52.88%), Query Frame = 3 Query: 150 CCSRFGWCGLTTDYCCEGCQSNCNQVVCGEC-DPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 CCS+ G+CG + DYC GCQ+ G C DP +G DG I + F D + + CP + FYT F+EA A+P FG + RKREIAA+F Sbjct: 11 CCSQHGYCGNSYDYCGPGCQA-------GPCWDPCEG---DGTLTVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104 HSP 2 Score: 49.2914 bits (116), Expect = 4.388e-21 Identity = 26/74 (35.14%), Postives = 38/74 (51.35%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYL 645 K ++ +FA HET C+ E +++YC + YPC +Y+GRGP+QLSWNYNY+ Sbjct: 97 KREIAAYFAHVTHETGH-------------LCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYI 157
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.266e-20 Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 642 K ++ F AQT HETTGGWP AP G Y E+G+ S Y+GRGPIQ+S+NYNY Sbjct: 45 KREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSD------------YFGRGPIQISYNYNY 93 HSP 2 Score: 58.151 bits (139), Expect = 1.266e-20 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 3 Query: 279 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 + +IS +FE +L +R FYTYDAFI AAK+FPAF +G+ +RKRE+AAF Sbjct: 1 VSSVISSSLFEKMLLHRG--------FYTYDAFIAAAKSFPAFATTGSTDVRKREVAAF 51 The following BLAST results are available for this feature:
BLAST of FC875681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875681 ID=FC875681; Name=FC875681; organism=Citrus clementina; type=EST; length=712bpback to top |