FC875685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875685 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14 Identity = 57/141 (40.43%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 247 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQAVLMGAVEGYRIAGGPL---GEVTDPLYPGGSFDPLGLADD 660 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL G WF QI+ + +D+ + A+ A Q V +E +R GG L E D YPG FDPL L + Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL-------GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTE 493 HSP 2 Score: 76.6406 bits (187), Expect = 1.299e-13 Identity = 52/144 (36.11%), Postives = 69/144 (47.92%), Query Frame = 1 Query: 238 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQAVLMGAVEGYRIAGG---PLGEVTDPLYPGGSFDPLGLADD 660 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL G+ WF+AG + L + + E +R GG GE+ D YPG FDPL L D Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQKGEL-DRSYPG--FDPLNLTTD 308
BLAST of FC875685 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 40/60 (66.67%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 502 SLIHAQSILAIWACQAVLMGAVEGYRI---AGGPLGEVTDPLYPGGSFDPLGLADDPGAF 672 +LIHA+S+LAI A Q +LMGAVEGYR A G GE D LYPGG FDPLGLADDP F Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTF 63 The following BLAST results are available for this feature:
BLAST of FC875685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875685 ID=FC875685; Name=FC875685; organism=Citrus clementina; type=EST; length=675bpback to top |