FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 4.074e-55
Identity = 109/143 (76.22%), Postives = 116/143 (81.12%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTV DA RL GR+F D  VQ DMK WPF VI     +P + V YKGE K F  EEISSMVL KM+EIAEAYLG T+ NAV+TVPAY NDSQRQATKDAG I+GLNV
Sbjct:   28 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVLDANRLNGRQFDDGVVQSDMKHWPFNVI-NDNSRPKVQVEYKGESKSFYPEEISSMVLTKMKEIAEAYLGKTVSNAVITVPAYSNDSQRQATKDAGTISGLNV 169          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 5.320e-55
Identity = 107/143 (74.83%), Postives = 121/143 (84.62%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPS+V FTDTERL GDAAKNQ AMNP NTVFDAKRLIGR+F D  VQGD+K +PFKV+   + KP I V +KGE K F  EEISSMVL KM+E AE++LG T+K+AV+TVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:   26 IIANDQGNRTTPSFVAFTDTERLSGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQGDIKHFPFKVV-DKSGKPQIQVEFKGETKVFTPEEISSMVLTKMKETAESFLGTTVKDAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 5.320e-55
Identity = 108/143 (75.52%), Postives = 119/143 (83.22%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIAN+QGNRTTPSYV FTDTERLIGDAAKNQVAMNP+NTVFDAKRLIGR+F+D SV  D K WPF VI     +P I V +KGE K F  EEISSMVL+KM EIA+AYLG  + + V+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   28 IIANEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFNDPSVTSDRKHWPFNVI-DDGSRPKIQVEFKGETKSFYPEEISSMVLLKMEEIADAYLGKKVTDVVITVPAYFNDSQRQATKDAGVIAGLNV 169          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 6.948e-55
Identity = 103/143 (72.03%), Postives = 123/143 (86.01%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            I+ANDQGNRTTPSYV FTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+D +VQ D+K WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +++AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   30 ILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAKRLIGRKFADPTVQSDLKHWPFQVVS-EGGKPKVRVSYRGEDKAFYPEEISSMVLSKMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNV 171          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 6.948e-55
Identity = 108/143 (75.52%), Postives = 120/143 (83.92%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMN  NTVFDAK LIGR+FSD  VQ D+K WPFK+ +G     ++ V +KGE K F  EEISSMVLIKMRE+AEA++G  +KNAV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   31 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNAHNTVFDAKPLIGRKFSDPIVQADIKHWPFKLTSGWRQAQIV-VQFKGESKTFQPEEISSMVLIKMREVAEAFIGKEVKNAVITVPAYFNDSQRQATKDAGAIAGLNV 172          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.185e-54
Identity = 107/143 (74.83%), Postives = 118/143 (82.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR++ D  +  D+K WPFKV++    KP I V YK E KQFA EEISSMVL KM+E AE  LG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   25 IIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNTVFDAKRLIGRKYDDPKIMEDVKHWPFKVVS-DGGKPKISVEYKEENKQFAPEEISSMVLTKMKETAEVILGTTVTDAVITVPAYFNDSQRQATKDAGRIAGLNV 166          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.185e-54
Identity = 108/143 (75.52%), Postives = 116/143 (81.12%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYVGFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQ DMK W F V+     KP+  V +KGE K F  EE SSM+L KM+E AEAYLG  + +AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   31 IIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFDDDVVQADMKHWSFTVV-NKNSKPLFQVEFKGETKTFTPEEFSSMILTKMKETAEAYLGTKVNHAVVTVPAYFNDSQRQATKDAGAIAGLNV 172          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 209.149 bits (531), Expect = 5.882e-54
Identity = 108/143 (75.52%), Postives = 119/143 (83.22%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPS+V FTDTERLIGDAAKNQ AMNP+NTVFDAKRLIGR F+D  VQ DMK +PFK+I     KP I V +KGE K F  E+ISSMVL KM+E AE+YLGA + +AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   26 IIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLI-DVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 7.682e-54
Identity = 107/143 (74.83%), Postives = 116/143 (81.12%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F D  V  D K +PFKVI     KP++ V YKGE K F  EEISSM+L KM+E AE +LG  +K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   26 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAMNPHNTVFDAKRLIGRKFDDPEVTNDAKHYPFKVI-DKGGKPVVQVEYKGETKTFTPEEISSMILTKMKETAENFLGTEVKDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 1.711e-53
Identity = 107/143 (74.83%), Postives = 117/143 (81.82%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQ A+NP NTVFDAKRLIGR+F D  V  D K +PFKVI+    KP++ V YKGE K F  EEISSMVL KM+E AE YLG T+ +AVVTVPAYFNDSQRQATKDAG IAG+NV
Sbjct:   26 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAINPHNTVFDAKRLIGRKFDDPEVTTDAKHFPFKVISRDG-KPVVQVEYKGETKTFTPEEISSMVLSKMKETAENYLGTTVNDAVVTVPAYFNDSQRQATKDAGTIAGMNV 167          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_DANRE4.074e-5576.22Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP72_PICAN5.320e-5574.83Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP70_HYDMA5.320e-5575.52Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP76_PIG6.948e-5572.03Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP70_BRELC6.948e-5575.52Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_CERCA1.185e-5474.83Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP70_BLAEM1.185e-5475.52Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP71_YEAST5.882e-5475.52Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP74_YEAST7.682e-5474.83Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP73_YEAST1.711e-5374.83Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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