FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.074e-47
Identity = 96/143 (67.13%), Postives = 113/143 (79.02%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            I+AN+QGNR TPSYV FTD ERLIGDAAKNQVA NP NT+FD KRLIG +++D SVQ D+K  PF V+     KP + V+ KGE+K F  EEIS M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV
Sbjct:   74 ILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNV 215          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.074e-47
Identity = 99/144 (68.75%), Postives = 114/144 (79.17%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNR TPS+V FTD ERLIG+AAKNQ A+NP  T+FD KRLIGR+F D  VQ D KL P++++     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  IK+AVVTVPAYFND+QRQATKDAGVIAGLNV
Sbjct:   60 IIANDQGNRITPSWVAFTDGERLIGEAAKNQAAVNPERTIFDVKRLIGRKFDDKEVQRDKKLVPYEIV-NKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNV 202          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.403e-47
Identity = 95/145 (65.52%), Postives = 117/145 (80.69%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT--ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNR TPSYV F+    ERLIGDAAKNQ+ +NP NT+FDAKRLIGR +++ +VQ D+K WPFK++   ++KP + V    E KQF  EE+S+MVL KM++IAE+YLG  +KNAVVTVPAYFND+Q+QATKDAG IAGLNV
Sbjct:   54 IIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIV-DKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNV 197          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 3.126e-47
Identity = 101/144 (70.14%), Postives = 114/144 (79.17%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFKVI     KP I V+   + K FA EEIS+MVL+KM+E AEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV
Sbjct:   54 IIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVIEKKT-KPYIEVDIGDQMKTFAPEEISAMVLVKMKETAEAYLGRKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNV 196          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 6.965e-47
Identity = 101/144 (70.14%), Postives = 114/144 (79.17%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNR TPSYV FT D ERLIGDAAKNQ+  NP NTVFDAKRLIGR +SD +VQ D+K +PFKV+   + KP I V+     K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAYFND+QRQATKDAGVIAGL V
Sbjct:   53 IIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKVVEKNS-KPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQV 195          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 9.096e-47
Identity = 91/143 (63.64%), Postives = 113/143 (79.02%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            I+AN+QGNR TPSYV FTD ERLIGDAAKNQ A NP NT+FD KRLIG +++D +VQ D+K  P+ V+    +KP + V  KGE+K+F  EE+S M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLN+
Sbjct:   75 ILANEQGNRITPSYVSFTDDERLIGDAAKNQAASNPKNTIFDIKRLIGLQYNDPTVQRDIKHLPYTVV-NKGNKPYVEVTVKGEKKEFTPEEVSGMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLNI 216          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.188e-46
Identity = 100/144 (69.44%), Postives = 110/144 (76.39%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNR TPSYV FT D ERLIGDAAKNQ+  NP NT+FD KRLIGR F D SVQ D+K +PFKV     +KP I       ++ FA EEIS+MVL KMR+IAE YLG  I NAVVTVPAYFND+QRQATKDAG IAGLNV
Sbjct:   62 IIANDQGNRITPSYVAFTADGERLIGDAAKNQLTSNPENTIFDVKRLIGRTFDDKSVQHDIKFYPFKV-TNANNKPHIQAATGEGDRSFAPEEISAMVLSKMRDIAEEYLGKKITNAVVTVPAYFNDAQRQATKDAGTIAGLNV 204          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.188e-46
Identity = 97/144 (67.36%), Postives = 113/144 (78.47%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVN-YKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNR TPS+V FT+ ERLIG+AAKNQ A NP  T+FD KRLIGR+F D  VQ DMKL P+K++     KP I V   +GE K F+ EEIS+M+L KM+E AE +LG  IK+AVVTVPAYFND+QRQATKDAGVIAGLNV
Sbjct:   60 IIANDQGNRITPSWVAFTNDERLIGEAAKNQAAANPERTIFDVKRLIGRKFEDKEVQKDMKLVPYKIV-NRDGKPYIQVKVQEGETKVFSPEEISAMILTKMKETAETFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNV 202          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.552e-46
Identity = 102/145 (70.34%), Postives = 115/145 (79.31%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKG-EEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFKV+   A KP I V+  G + K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV
Sbjct:   50 IIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKA-KPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNV 193          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.647e-46
Identity = 91/143 (63.64%), Postives = 114/143 (79.72%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            I+ANDQG+R TPSYV FT+ ERL+GDAAKNQ A NP NT+FD KRLIG ++ D SVQ D+K +P+KV      KP++ V  KGE+K +  EEIS+M+L KM++IA+ YLG  + +AVVTVPAYFND+QRQATKDAG+IAGLNV
Sbjct:   61 ILANDQGSRITPSYVAFTEDERLVGDAAKNQAANNPFNTIFDIKRLIGLKYKDESVQRDIKHFPYKV-KNKDGKPVVVVETKGEKKTYTPEEISAMILTKMKDIAQDYLGKKVTHAVVTVPAYFNDAQRQATKDAGIIAGLNV 202          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_YEAST1.074e-4767.1378 kDa glucose-regulated protein homolog OS=Saccha... [more]
BIP5_TOBAC1.074e-4768.75Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
HSP7D_CAEEL1.403e-4765.52Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
GRP78_XENLA3.126e-4770.1478 kDa glucose-regulated protein OS=Xenopus laevis... [more]
HSP7C_DROME6.965e-4770.14Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
GRP78_KLULA9.096e-4763.6478 kDa glucose-regulated protein homolog OS=Kluyve... [more]
GRP78_APLCA1.188e-4669.4478 kDa glucose-regulated protein OS=Aplysia califo... [more]
BIP_SPIOL1.188e-4667.36Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
GRP78_CHICK1.552e-4670.3478 kDa glucose-regulated protein OS=Gallus gallus ... [more]
GRP78_YARLI2.647e-4663.6478 kDa glucose-regulated protein homolog OS=Yarrow... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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