FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP7 (Chaperone protein dnaK OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K++A  AD     ++ KG +   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIVA--ADNGDAWLDVKGTKT--APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP3 (Chaperone protein dnaK OS=Klebsiella pneumoniae (strain 342) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K++A  AD     ++ KG +   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIVA--ADNGDAWLDVKGTKT--APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_EDWI9 (Chaperone protein dnaK OS=Edwardsiella ictaluri (strain 93-146) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF DA  Q D  + P+K++A       + V    ++++ A  +IS+ VL KM++ AE +LG T+  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VLENAEGDRTTPSIIAYTQDGEVLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDAEAQRDKDIMPYKIVAADNGDAWVEV----KDQKIAPPQISAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_CHRVO (Chaperone protein dnaK OS=Chromobacterium violaceum GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +GNRTTPS + +  D E L+G  AK Q   NP NT++ AKRLIGRRF D  VQ D+ L PF+++        + V     +++ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGNRTTPSIIAYVEDGEILVGAPAKRQAVTNPKNTIYAAKRLIGRRFEDKEVQKDIDLMPFEILKAKNGDAWVKVR----DQELAPPQISAEVLRKMKKAAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BORGA (Chaperone protein dnaK OS=Borrelia garinii GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 74/144 (51.39%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +T+  ERL+G  AKNQ+  NP NT++  KR +GRRF +  V  ++K+ P+K+  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEE--VASEIKMVPYKIEKGLNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BORBZ (Chaperone protein dnaK OS=Borrelia burgdorferi (strain ZS7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 74/144 (51.39%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +T+  ERL+G  AKNQ+  NP NT++  KR +GRRF +  V  ++K+ P+K+  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEE--VASEIKMVPYKIEKGLNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BORBU (Chaperone protein dnaK OS=Borrelia burgdorferi GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 74/144 (51.39%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +T+  ERL+G  AKNQ+  NP NT++  KR +GRRF +  V  ++K+ P+K+  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEE--VASEIKMVPYKIEKGLNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BORAP (Chaperone protein dnaK OS=Borrelia afzelii (strain PKo) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 74/144 (51.39%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +T+  ERL+G  AKNQ+  NP NT++  KR +GRRF +  V  ++K+ P+K+  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEE--VASEIKMVPYKIEKGLNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_YERPY (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.175e-32
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_YERPS (Chaperone protein dnaK OS=Yersinia pseudotuberculosis GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.175e-32
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_KLEP71.665e-3252.08Chaperone protein dnaK OS=Klebsiella pneumoniae su... [more]
DNAK_KLEP31.665e-3252.08Chaperone protein dnaK OS=Klebsiella pneumoniae (s... [more]
DNAK_EDWI91.665e-3250.00Chaperone protein dnaK OS=Edwardsiella ictaluri (s... [more]
DNAK_CHRVO1.665e-3251.39Chaperone protein dnaK OS=Chromobacterium violaceu... [more]
DNAK_BORGA1.665e-3251.39Chaperone protein dnaK OS=Borrelia garinii GN=dnaK... [more]
DNAK_BORBZ1.665e-3251.39Chaperone protein dnaK OS=Borrelia burgdorferi (st... [more]
DNAK_BORBU1.665e-3251.39Chaperone protein dnaK OS=Borrelia burgdorferi GN=... [more]
DNAK_BORAP1.665e-3251.39Chaperone protein dnaK OS=Borrelia afzelii (strain... [more]
DNAK_YERPY2.175e-3252.08Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPS2.175e-3252.08Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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