FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_NITEU (Chaperone protein dnaK OS=Nitrosomonas europaea GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.710e-32
Identity = 75/144 (52.08%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+ + P+K++   AD     +  +G  ++ A  E+S+ VLIKM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGARTTPSIVAYAEDNEILVGASAKRQAVTNPENTLFAIKRLIGRRFDEEVVQKDISVTPYKIVR--ADNNDAWIEARG--RKIAPPEVSAQVLIKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAP (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Schizaphis graminum GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.710e-32
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T+  E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+ +I        I V    ++++ A  +IS+ VL KM++ AE YLG +IK AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENSEGDRTTPSIIAYTEKGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFRDDEVQRDIKIMPYSIINSENGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGESIKEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_AGGAC (Chaperone protein dnaK OS=Aggregatibacter actinomycetemcomitans GN=dnaK PE=2 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 3.710e-32
Identity = 76/144 (52.78%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  V+ D+ + PF +    AD     V  KGE+   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENAEGDRTTPSIIAYTNDNETLVGQPAKRQAVTNPKNTLFAIKRLIGRRFEDEEVKRDIDIMPFAITK--ADNGDAWVEVKGEK--LAPPQISAEVLKKMKKAAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_AERS4 (Chaperone protein dnaK OS=Aeromonas salmonicida (strain A449) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.710e-32
Identity = 76/144 (52.78%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS + + D  E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+K+ P+ +    AD     V  KG  K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENAEGDRTTPSIIAYADDGEILVGQPAKRQAITNPKNTLFAIKRLIGRRFEDEEVQRDLKIMPYAI--AKADNGDAWVEVKG--KKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK1_PHOPR (Chaperone protein dnaK 1 OS=Photobacterium profundum GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.710e-32
Identity = 75/144 (52.08%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTT S V +T D E L+G  AK Q   NP NT++  KRLIGRRF D  VQ D+K+ PFK++   AD     V  KG++   AA ++S+ +L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGERTTASVVAYTQDGETLVGQPAKRQAVTNPENTLYAIKRLIGRRFEDEEVQRDLKIMPFKIVK--ADNGDAWVEAKGQK--MAAPQVSAEILKKMKKTAEDFLGEEVTAAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_SULMW (Chaperone protein dnaK OS=Sulcia muelleri (strain GWSS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32
Identity = 70/144 (48.61%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G RTTPS + F +  E  +GD AK Q   NP+ T+F  KR +GR FS+  V  ++K  P+K+I G  D P + +      K +  +EIS+M+L KM++ AE YLG  +K AV+TVPAYFND+QRQATK+AG IAGLNV
Sbjct:   26 VVPNSEGKRTTPSIIAFIEGGETKVGDPAKRQAVTNPSKTIFSIKRFMGRNFSE--VTEELKNIPYKIIKGENDTPRVSIG----NKLYTPQEISAMILQKMKKTAEDYLGNEVKQAVITVPAYFNDAQRQATKEAGEIAGLNV 163          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_STRM5 (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+DA VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWVATS---DAKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32
Identity = 67/143 (46.85%), Postives = 93/143 (65.03%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + F ++ERL+G  AK Q   NP NT++  KRLIGR F+D  V+ D  L P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIDNAEGERTTPSIIAFANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWV----EADNHKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEV 164          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEU5 (Chaperone protein dnaK OS=Pseudomonas stutzeri (strain A1501) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +T D E L+G +AK Q   NP NT++  KRLIGRRF +  VQ D+K+ P+ ++   AD     V  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGGRTTPSIIAYTNDGETLVGQSAKRQAVTNPQNTLYAVKRLIGRRFEEDVVQKDIKMVPYTIVK--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_NITEC (Chaperone protein dnaK OS=Nitrosomonas eutropha (strain C91) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGR+F +  VQ D+ + P+K++   AD     +  +G  ++ A  E+S+ VL+KM++ AE YLG ++  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGTRTTPSIVAYAEDNEVLVGASAKRQAVTNPENTLFAIKRLIGRKFDEEVVQKDISVTPYKIVR--ADNNDAWIEVRG--RKIAPPEVSAQVLMKMKKTAEDYLGESVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_NITEU3.710e-3252.08Chaperone protein dnaK OS=Nitrosomonas europaea GN... [more]
DNAK_BUCAP3.710e-3250.69Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_AGGAC3.710e-3252.78Chaperone protein dnaK OS=Aggregatibacter actinomy... [more]
DNAK_AERS43.710e-3252.78Chaperone protein dnaK OS=Aeromonas salmonicida (s... [more]
DNAK1_PHOPR3.710e-3252.08Chaperone protein dnaK 1 OS=Photobacterium profund... [more]
DNAK_SULMW4.846e-3248.61Chaperone protein dnaK OS=Sulcia muelleri (strain ... [more]
DNAK_STRM54.846e-3250.69Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_RICPR4.846e-3246.85Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_PSEU54.846e-3252.08Chaperone protein dnaK OS=Pseudomonas stutzeri (st... [more]
DNAK_NITEC4.846e-3250.69Chaperone protein dnaK OS=Nitrosomonas eutropha (s... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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