FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_DECAR (Chaperone protein dnaK OS=Dechloromonas aromatica (strain RCB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32
Identity = 73/144 (50.69%), Postives = 94/144 (65.28%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS +G+T D E L G  AK Q   NP NT++  KRLIGRRF +  VQ D+ L PFK++        +    +  +K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGARTTPSIIGYTEDGEILCGAPAKRQAVTNPKNTLYAVKRLIGRRFEEKEVQKDISLMPFKIVKADNGDAWV----EARDKKIAPPQVSAEVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK2_PHOPR (Chaperone protein dnaK 2 OS=Photobacterium profundum GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32
Identity = 75/144 (52.08%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTT S + +T D E L+G  AK Q   NP NT+F  KRL+GRRF D  VQ D+++ PF ++   AD     V  KG  K+ AA ++S+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENAEGERTTASVIAYTQDGEILVGQPAKRQAVTNPKNTLFAIKRLLGRRFEDEEVQRDIEIMPFNIVK--ADNGDAWVEAKG--KKMAAPQVSAEVLKKMKKTAEDYLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_STRMK (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 6.328e-32
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+DA VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWVATS---DGKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_RICAH (Chaperone protein dnaK OS=Rickettsia akari (strain Hartford) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 6.328e-32
Identity = 65/143 (45.45%), Postives = 94/143 (65.73%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + F + E+L+G +AK Q   NP+NT++  KRLIGR F+D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGERTTPSIIAFANGEKLVGQSAKRQAVTNPSNTIYAVKRLIGRNFTDPMVKKDQDIVPYNIVKADNGDAWV----EADSNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEV 164          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPF (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain Pf0-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 6.328e-32
Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K++        +    +   KQ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEEVVQKDIKLVPYKIVKANNGDAWV----EASGKQMAPPQISAEVLKKMKKTAEDYLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 6.328e-32
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N++G RTTPS V +T D +RL+G  AK Q   NP NT++ AKR IGRRF +  +Q ++KL P+ V+A   D       +K + K  + EEI + VL K++++AE YLG  +  AVVTVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLVNEEGARTTPSVVAYTKDGDRLVGQIAKRQAVTNPENTIYSAKRFIGRRFEE--IQEEIKLVPYTVVAKGND-----CAFKVQGKTASPEEIGAAVLAKLKKVAEDYLGEPVTEAVVTVPAYFNDAQRQATKDAGRIAGLEV 162          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBL (Chaperone protein dnaK OS=Acidobacteria bacterium (strain Ellin345) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 6.328e-32
Identity = 72/144 (50.00%), Postives = 99/144 (68.75%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N++G RTTPS VGFT T ERL+G  AK Q   NP NT+F  KR +GRR+++  V  +MK+ P+KV        ++      + K+++  EIS+ +L K+++ AE YLG T+  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIPNEEGGRTTPSVVGFTKTGERLVGQVAKRQAITNPENTIFSIKRFMGRRYNE--VNEEMKMVPYKVQQAGDHVAVLA-----QGKEYSPAEISAYILQKLKKAAEDYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLDV 162          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPG (Chaperone protein dnaK OS=Pseudomonas putida (strain GB-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 8.265e-32
Identity = 75/144 (52.08%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K++ G      +    +   K  A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIVAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEEVVQKDIKLVPYKIVKGGNGDAWV----QAGGKDMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PELLD (Chaperone protein dnaK OS=Pelodictyon luteolum (strain DSM 273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 8.265e-32
Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +GNRTTPS V FT T +RL+G AAK Q   NP NT+F  KR IGR+F +  V  + K+ P++V+    +        K  +K ++ +E+S+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENSEGNRTTPSMVAFTKTGDRLVGQAAKRQAITNPKNTIFSIKRFIGRKFDE--VPNEKKIAPYEVVNEGGE-----ARVKINDKTYSPQEVSAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 162          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_NITWN (Chaperone protein dnaK OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 8.265e-32
Identity = 74/145 (51.03%), Postives = 97/145 (66.90%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V F+D  ERL+G  AK Q   NP  T+F  KRLIGRR+ D +V+ D +L P+K+  AG  D  +     + + K ++  +IS+  L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDPTVEKDKQLVPYKIAKAGNGDAWV-----EADGKTYSPSQISAFTLQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_DECAR4.846e-3250.69Chaperone protein dnaK OS=Dechloromonas aromatica ... [more]
DNAK2_PHOPR4.846e-3252.08Chaperone protein dnaK 2 OS=Photobacterium profund... [more]
DNAK_STRMK6.328e-3250.69Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_RICAH6.328e-3245.45Chaperone protein dnaK OS=Rickettsia akari (strain... [more]
DNAK_PSEPF6.328e-3251.39Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_BDEBA6.328e-3250.69Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
DNAK_ACIBL6.328e-3250.00Chaperone protein dnaK OS=Acidobacteria bacterium ... [more]
DNAK_PSEPG8.265e-3252.08Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_PELLD8.265e-3249.31Chaperone protein dnaK OS=Pelodictyon luteolum (st... [more]
DNAK_NITWN8.265e-3251.03Chaperone protein dnaK OS=Nitrobacter winogradskyi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
back to top