FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_METS4 (Chaperone protein dnaK OS=Methylobacterium sp. (strain 4-46) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31
Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V FTD  ERL+G  AK Q   NP+ T F  KRLIGR + D   Q D  L P+ ++ AG  D  +     + + KQF+  +IS+  L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGARTTPSIVAFTDEGERLVGQPAKRQAVTNPSRTFFAIKRLIGRTYDDPMTQKDKGLVPYHIVRAGNGDAWV-----EADGKQFSPSQISAFTLQKMKETAESYLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_AERHH (Chaperone protein dnaK OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS + + D  E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+++ P+ +    AD     V  KG  K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENAEGDRTTPSIIAYADDGEILVGQPAKRQAITNPKNTLFAIKRLIGRRFEDDEVQRDLEIMPYAI--AKADNGDAWVEVKG--KKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_WIGBR (Chaperone protein dnaK OS=Wigglesworthia glossinidia brevipalpis GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 70/144 (48.61%), Postives = 101/144 (70.14%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS + +T+  E L+G  AK Q   NP NT F  KRLIGR+F+D  VQ D+ + P+K+++  ++   + +N K ++   A  +IS+ +L KM++ AE Y+G +I  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   30 VIENSEGDRTTPSIIAYTEENEILVGQPAKRQSVTNPKNTFFAIKRLIGRKFTDHEVQRDVNIMPYKIVS--SENGDVWLNVKNQK--VAPPQISAEILKKMKKTAEDYIGKSITEAVITVPAYFNDTQRQATKDAGKIAGLDV 169          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP2 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain HaA2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 69/144 (47.92%), Postives = 94/144 (65.28%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V F+D  ERL+G  AK Q   NP  T F  KRL+GRR+ D  V+ D KL P+K++        +    + + + ++  ++S+ +L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_RHOBA (Chaperone protein dnaK OS=Rhodopirellula baltica GN=dnaK PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 71/144 (49.31%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +GNR TPS V FTD  E ++G+ A+ Q   NP  TV+ AKR +GRR ++  VQ + K+ P+ +  GP D   I V     + ++  +EIS+ VL K++E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   29 VIPNPEGNRLTPSVVAFTDKQETIVGEPARRQAVTNPKRTVYSAKRFMGRRHNE--VQSEEKMVPYGITGGPGDYVKIQVG----DSEYTPQEISAKVLRKLKESAESYLGHKVNKAVITVPAYFNDAQRQATKDAGQIAGLEV 166          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPW (Chaperone protein dnaK OS=Pseudomonas putida (strain W619) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K++        +    +   K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIVAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEDVVQKDIKLVPYKIVKANNGDAWV----EASGKEMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 77/144 (53.47%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS + ++ D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + PF +I   AD     V  K E+   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGDRTTPSIIAYSQDGETLVGQPAKRQAITNPKNTLFAIKRLIGRRFEDKEVQRDIDIMPFDIIK--ADNGDAWVQAKDEK--LAPPQISAEVLKKMKKTAEDYLGEEVTAAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_LEPCP (Chaperone protein dnaK OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 74/144 (51.39%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D+ L P+K+ A  AD     V  +G  K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPRNTLYAVKRLIGRKFTEKEVQKDIDLMPYKIAA--ADNGDAWVEVRG--KRMAPPQVSAEVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_CHLFF (Chaperone protein dnaK OS=Chlamydophila felis (strain Fe/C-56) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 72/143 (50.35%), Postives = 95/143 (66.43%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I + +G RTTPS V F  +E L+G  AK Q   NP  T+   KR IGR++S+  V+ ++K  P+KV +G     +  V    E KQ+  EEI + +L+KM+E AEAYLG TI  AV+TVPAYFNDSQR +TKDAG IAGL+V
Sbjct:   32 VITSSEGTRTTPSIVAFKGSETLVGIPAKRQAVTNPEKTLASTKRFIGRKYSE--VESEIKTVPYKVTSGSNGDAVFQV----EGKQYTPEEIGAHILMKMKETAEAYLGETITEAVITVPAYFNDSQRASTKDAGRIAGLDV 168          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BRAJA (Chaperone protein dnaK OS=Bradyrhizobium japonicum GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V  TD  ERL+G  AK Q   NP  T F  KRLIGRR+ D  V+ D KL P+K++        +    + + + ++  ++S+ +L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENSEGMRTTPSIVAVTDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_METS41.410e-3151.72Chaperone protein dnaK OS=Methylobacterium sp. (st... [more]
DNAK_AERHH1.410e-3152.08Chaperone protein dnaK OS=Aeromonas hydrophila sub... [more]
DNAK_WIGBR1.841e-3148.61Chaperone protein dnaK OS=Wigglesworthia glossinid... [more]
DNAK_RHOP21.841e-3147.92Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RHOBA1.841e-3149.31Chaperone protein dnaK OS=Rhodopirellula baltica G... [more]
DNAK_PSEPW1.841e-3151.39Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_PSEA61.841e-3153.47Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_LEPCP1.841e-3151.39Chaperone protein dnaK OS=Leptothrix cholodnii (st... [more]
DNAK_CHLFF1.841e-3150.35Chaperone protein dnaK OS=Chlamydophila felis (str... [more]
DNAK_BRAJA1.841e-3148.61Chaperone protein dnaK OS=Bradyrhizobium japonicum... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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