FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31
Identity = 72/144 (50.00%), Postives = 92/144 (63.89%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V FTD  ERL+G  AK Q   NP  T F  KRLIGR F D   + D+ L P+K+   P     +    + + K ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGARTTPSIVAFTDDGERLVGQPAKRQGVTNPERTFFAIKRLIGRTFEDPMTKKDIGLVPYKITKAPNGDAWV----EADGKPYSPSQISAFILQKMKETAESYLGQPVSQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_XANCP (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DSKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_XANCB (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DSKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_XANC8 (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DSKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_THERP (Chaperone protein dnaK OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dnaK PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 73/144 (50.69%), Postives = 94/144 (65.28%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G R TPS V  T T ERL+G  AK Q   NP NT++  KR +GRRF D  VQ  +KL P++V          GV  K  ++ +  +EIS+M+L K+++ AEAYLG T+  AV+TVPAYF+DSQR ATKDAG IAGL V
Sbjct:   26 VIPNAEGERLTPSVVAITPTGERLVGRFAKRQAITNPENTIYSIKRFMGRRFDDPEVQRTIKLVPYQVRRAQNG----GVEVKMGDRWYTPQEISAMILQKLKQDAEAYLGETVDKAVITVPAYFDDSQRNATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPK (Chaperone protein dnaK OS=Pseudomonas putida (strain KT2440) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K++        +    +   K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIVAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEDVVQKDIKLVPYKIVKANNGDAWV----EAAGKEMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEP1 (Chaperone protein dnaK OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K++        +    +   K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIVAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEDVVQKDIKLVPYKIVKANNGDAWV----EAAGKEMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEE4 (Chaperone protein dnaK OS=Pseudomonas entomophila (strain L48) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 73/144 (50.69%), Postives = 94/144 (65.28%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K++        +    +   K  A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFDEEVVQKDIKLVPYKIVKASNGDAWV----QASGKDMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_OLICO (Chaperone protein dnaK OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 71/144 (49.31%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V  TD  ERL+G  AK Q   NP  T+F  KRLIGRR+ D +V  D  L P+K++        +    + + K ++  +IS+ +L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGMRTTPSIVALTDDDERLVGQPAKRQAVTNPEKTIFAVKRLIGRRYDDPTVAKDKDLVPYKIVKASNGDAWV----EADGKIYSPSQISAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_NITHX (Chaperone protein dnaK OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31
Identity = 72/144 (50.00%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V F+D  ERL+G  AK Q   NP  T+F  KRLIGRR+ D +V+ D  L P+K+         + V    + K ++  +IS+  L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDPTVEKDKHLVPYKIAKAGNGDAWVEV----DGKTYSPSQISAFTLQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BEII91.841e-3150.00Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
DNAK_XANCP2.405e-3150.00Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANCB2.405e-3150.00Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANC82.405e-3150.00Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_THERP2.405e-3150.69Chaperone protein dnaK OS=Thermomicrobium roseum (... [more]
DNAK_PSEPK2.405e-3151.39Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_PSEP12.405e-3151.39Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_PSEE42.405e-3150.69Chaperone protein dnaK OS=Pseudomonas entomophila ... [more]
DNAK_OLICO2.405e-3149.31Chaperone protein dnaK OS=Oligotropha carboxidovor... [more]
DNAK_NITHX2.405e-3150.00Chaperone protein dnaK OS=Nitrobacter hamburgensis... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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