FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_XANC5 (Chaperone protein dnaK OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DAKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEFS (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain SBW25) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGR+F +  VQ D+K+ P+K+         + VN      + +A +IS+ VL KM++ AE YLG T+  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFDEEVVQKDIKMVPYKIAKADNGDAWVEVN----GNKMSAPQISAEVLKKMKKTAEDYLGETVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEAE (Chaperone protein dnaK OS=Pseudomonas aeruginosa GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+ ++   AD     V  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIVK--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEAB (Chaperone protein dnaK OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+ ++   AD     V  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIVK--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA8 (Chaperone protein dnaK OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+ ++   AD     V  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIVK--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA7 (Chaperone protein dnaK OS=Pseudomonas aeruginosa (strain PA7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+ ++   AD     V  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIVK--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PROMH (Chaperone protein dnaK OS=Proteus mirabilis (strain HI4320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +  D E L+G  AK Q   N  NT+F  KRLIGRRF DA VQ D+ + P+K+I   AD     V  + E+   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENGEGDRTTPSIVAYAQDGEILVGQPAKRQAVTNSQNTLFAIKRLIGRRFEDAEVQRDVSIMPYKIIK--ADNGDAWVEARNEK--MAPPQVSAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_ANAVT (Chaperone protein dnaK OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31
Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +IAN +G RTTPS VGF+ D ER++G  A+ Q  +NP NT F  KR IGRR+++ S +   K  P+ +     D   I V      K+FAAEEIS+MVL K+ + A AYLGA +  AV+TVPAYFNDSQRQAT+DAG IAGL V
Sbjct:   26 VIANAEGMRTTPSVVGFSKDGERVVGQMARRQTVLNPQNTFFAVKRYIGRRYNELSPES--KRVPYTIRKD--DVGNIKVACPRLNKEFAAEEISAMVLKKLADDASAYLGAAVTGAVITVPAYFNDSQRQATRDAGRIAGLEV 165
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP7M_DICDI (Heat shock 70 kDa protein, mitochondrial OS=Dictyostelium discoideum GN=mhsp70 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.102e-31
Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G RTTPS V FT D ++++G  AK Q+  N  NT+F  KRLIGRRF D   + DM + P+K++ GP       V  KG  K  +  E  +MVL KM+E AE  LG  + +AV+TVPAYF+DSQRQAT+DAG IAGL V
Sbjct:   54 VLENAEGGRTTPSVVAFTEDNQKIVGLPAKRQMVTNAENTLFATKRLIGRRFDDPMTKKDMTMVPYKIVKGPNGDAWFEV--KG--KMISPSEAGAMVLQKMKETAETNLGGPVTDAVITVPAYFDDSQRQATRDAGTIAGLKV 193
[Close]
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_XANAC (Chaperone protein dnaK OS=Xanthomonas axonopodis pv. citri GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.102e-31
Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DGKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_XANC53.141e-3150.00Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_PSEFS3.141e-3150.00Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_PSEAE3.141e-3151.39Chaperone protein dnaK OS=Pseudomonas aeruginosa G... [more]
DNAK_PSEAB3.141e-3151.39Chaperone protein dnaK OS=Pseudomonas aeruginosa (... [more]
DNAK_PSEA83.141e-3151.39Chaperone protein dnaK OS=Pseudomonas aeruginosa (... [more]
DNAK_PSEA73.141e-3151.39Chaperone protein dnaK OS=Pseudomonas aeruginosa (... [more]
DNAK_PROMH3.141e-3152.08Chaperone protein dnaK OS=Proteus mirabilis (strai... [more]
DNAK_ANAVT3.141e-3153.47Chaperone protein dnaK OS=Anabaena variabilis (str... [more]
HSP7M_DICDI4.102e-3150.00Heat shock 70 kDa protein, mitochondrial OS=Dictyo... [more]
DNAK_XANAC4.102e-3150.00Chaperone protein dnaK OS=Xanthomonas axonopodis p... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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