FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:197..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PSEF5 (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+K++    +   + VN     ++ A  +IS+ +L KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   26 VIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRRFDEEVVQKDIQMVPYKIVKADNNDAWVEVN----GQKMAPPQISAEILKKMKKTAEDYLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_POLSJ (Chaperone protein dnaK OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   N  NT++  KRLIGR+F++  VQ D+ L P+K+ A  AD     V  +G  KQ +A+++S+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENSEGARTTPSIVAYQEDGEVLVGASAKRQAVTNAKNTLYAIKRLIGRKFTEKEVQKDINLMPYKIAA--ADNGDAWVEVRG--KQISAQQVSADILRKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_LAWIP (Chaperone protein dnaK OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 3
Query:    6 IANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            I N  G RTTPS V FTD +RL+GDAAK Q   N   T+F  KRL+GRR     V    +  P+K++A       + +    + ++++ +EIS+++L K++  AEAYLG ++  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   27 ITNPNGGRTTPSVVAFTDKDRLVGDAAKRQAITNSARTIFAVKRLMGRRADSPEVVHWKEHAPYKIVAASNGDAAVEI----DGREYSPQEISAIILSKLKADAEAYLGESVSEAVITVPAYFNDAQRQATKDAGRIAGLDV 164          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_LARHH (Chaperone protein dnaK OS=Laribacter hongkongensis (strain HLHK9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 75/144 (52.08%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G  AK Q   N  NT+F +KRLIGRRF +  VQ D+ L PF ++   AD     ++ +G  K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENSEGARTTPSVVAYMEDGEILVGAPAKRQAVTNAKNTIFASKRLIGRRFEEKEVQKDIDLMPFSIVK--ADNGDAWIDVRG--KKLAPPQISAEVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_FRATW (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLW-PFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +TD+ E L+G AAK Q   NP NT F  KRLIGR++ D +VQ D+K   P+ VI        +      E K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWVATK---EGKKMAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_FRATU (Chaperone protein dnaK OS=Francisella tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLW-PFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +TD+ E L+G AAK Q   NP NT F  KRLIGR++ D +VQ D+K   P+ VI        +      E K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWVATK---EGKKMAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_FRATT (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLW-PFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +TD+ E L+G AAK Q   NP NT F  KRLIGR++ D +VQ D+K   P+ VI        +      E K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWVATK---EGKKMAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_FRATO (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLW-PFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +TD+ E L+G AAK Q   NP NT F  KRLIGR++ D +VQ D+K   P+ VI        +      E K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWVATK---EGKKMAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_FRATN (Chaperone protein dnaK OS=Francisella tularensis subsp. novicida (strain U112) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLW-PFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +TD+ E L+G AAK Q   NP NT F  KRLIGR++ D +VQ D+K   P+ VI        +      E K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWVATK---EGKKMAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_FRATM (Chaperone protein dnaK OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLW-PFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS V +TD+ E L+G AAK Q   NP NT F  KRLIGR++ D +VQ D+K   P+ VI        +      E K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWVATK---EGKKMAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 167          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PSEF55.357e-3148.61Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_POLSJ5.357e-3150.69Chaperone protein dnaK OS=Polaromonas sp. (strain ... [more]
DNAK_LAWIP5.357e-3147.89Chaperone protein dnaK OS=Lawsonia intracellularis... [more]
DNAK_LARHH5.357e-3152.08Chaperone protein dnaK OS=Laribacter hongkongensis... [more]
DNAK_FRATW5.357e-3151.72Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATU5.357e-3151.72Chaperone protein dnaK OS=Francisella tularensis G... [more]
DNAK_FRATT5.357e-3151.72Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATO5.357e-3151.72Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATN5.357e-3151.72Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATM5.357e-3151.72Chaperone protein dnaK OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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