FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:197..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.552e-57
Identity = 112/143 (78.32%), Postives = 119/143 (83.22%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DM  WPF VI     +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAV+TVPAYFNDSQRQATKDAG I+GLNV
Sbjct:   28 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDHVVQSDMNDWPFNVI-NDNTRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVNNAVITVPAYFNDSQRQATKDAGTISGLNV 169          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 3.332e-57
Identity = 112/143 (78.32%), Postives = 122/143 (85.31%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTD+ERLIGD AKNQVAMNPTNTVFDAKRLIGRRF D SVQ DMK WPF+V      K  I V YKGE+K F+AEEISSMVL KM+E+AE+YLG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   26 IIANDQGNRTTPSYVAFTDSERLIGDGAKNQVAMNPTNTVFDAKRLIGRRFDDPSVQSDMKHWPFEV-TQVGGKLKICVEYKGEKKMFSAEEISSMVLTKMKEVAESYLGRTVSDAVITVPAYFNDSQRQATKDAGAIAGLNV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 3.332e-57
Identity = 112/143 (78.32%), Postives = 122/143 (85.31%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+VI     KP + V+YKGE K F  EEISSMVL K++E AEA+LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   30 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVI-NEGGKPKVLVSYKGENKAFYPEEISSMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 4.352e-57
Identity = 113/143 (79.02%), Postives = 121/143 (84.62%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+VI    DKP + V+YKGE K F  EEISSMVL KM+EIAEA LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   28 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVI-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEADLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 169          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 4.352e-57
Identity = 109/143 (76.22%), Postives = 121/143 (84.62%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            II NDQGNRTTPSYV FTDTERLIGDAAKNQ A NP NT+FDAKRLIGR+F D +VQ DMK WPFKV  GP  KP I V ++GE+K F AEEISSMVL KM+EIAEA+LG ++K+ V+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   27 IIPNDQGNRTTPSYVAFTDTERLIGDAAKNQEARNPENTIFDAKRLIGRKFDDRTVQEDMKHWPFKVTNGPNGKPNIEVTFQGEKKTFHAEEISSMVLTKMKEIAEAFLGKSVKDVVITVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 5.684e-57
Identity = 110/143 (76.92%), Postives = 122/143 (85.31%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ D+K WPF+V++    KP + V YKGEEK F  EEISSMVL KM+E AEAYLG  + NAV+TVPAYFNDSQRQATKDAGV+AGLN+
Sbjct:   29 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQCDLKHWPFQVVSDEG-KPKVKVEYKGEEKSFFPEEISSMVLTKMKETAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVLAGLNI 170          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 7.424e-57
Identity = 115/145 (79.31%), Postives = 124/145 (85.52%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGA--TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP +TVFDAKRLIGR+FSD  VQ D+KLWPF+V AG  D P I V+YK EEK F AEEISSMVLIKM+E A+A LGA   +K AVVTVPAYFNDSQRQATKDAG+IAGL V
Sbjct:   29 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEEISSMVLIKMKETAQASLGADREVKKAVVTVPAYFNDSQRQATKDAGMIAGLEV 173          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 7.424e-57
Identity = 109/143 (76.22%), Postives = 120/143 (83.92%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR++ D +VQ DMK WPF+V+     KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  ++ AV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:   29 IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFRVV-NEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGKKVETAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 9.696e-57
Identity = 111/143 (77.62%), Postives = 122/143 (85.31%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            IIANDQGNRTTPS+V FTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F D  VQGD+K +PFKV+   A KPMI V YKGE K F+ EEISSM+L KM+E AE +LG T+K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   26 IIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDHEVQGDIKHFPFKVV-DKASKPMIQVEYKGETKTFSPEEISSMILGKMKETAEGFLGTTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 9.696e-57
Identity = 108/143 (75.52%), Postives = 121/143 (84.62%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            II NDQGNRTTPSYV FTDTERLIGDAAKNQ A NP NT+FDAKRLIGR+F D +VQ DMK WPFKV  GP  KP I V ++GE+K F AEEISSMVL KM+EIAE++LG ++K+ V+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   27 IIPNDQGNRTTPSYVAFTDTERLIGDAAKNQEARNPENTIFDAKRLIGRKFDDRTVQEDMKHWPFKVTNGPNGKPNIEVTFQGEKKTFHAEEISSMVLTKMKEIAESFLGKSVKDVVITVPAYFNDSQRQATKDAGTIAGLNV 169          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_ORYLA2.552e-5778.32Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP70_SCHMA3.332e-5778.32Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HS71L_HUMAN3.332e-5778.32Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP71_CERAE4.352e-5779.02Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_THEPA4.352e-5776.22Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_XENLA5.684e-5776.92Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_CHLRE7.424e-5779.31Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_CHICK7.424e-5776.22Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP72_CANAL9.696e-5777.62Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_THEAN9.696e-5775.52Heat shock 70 kDa protein OS=Theileria annulata GN... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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