FC875689

Overview
NameFC875689
Unique NameFC875689
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14122 contig Ccv1_Contig14122:46..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.673e-36
Identity = 73/132 (55.30%), Postives = 93/132 (70.45%), Query Frame = 3
Query:  111 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPL 506
            ++LH + RVGDLDR+IKFY +  GM+LLR  + PE KY+ AFLG+   +S   +ELTYN+GV  Y+ GT +GH AI  +D+Y   E +RA GGNVTRE GPVKGG+T IAFV+DPDGY  E I+   T   L
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133          

HSP 2 Score: 85.1149 bits (209), Expect = 4.012e-16
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 3
Query:  504 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 695
            +   MLRVGDL RSIKFY+  LGM+LLRT + PEYKYTLA LGY + +    +ELTYN+GV +Y
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKY 66          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 3
Query:  111 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 485
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  504 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 695
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+    Y
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERY 66          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 3
Query:  111 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 485
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  504 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 695
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+    Y
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERY 66          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 82/228 (35.96%), Postives = 111/228 (48.68%), Query Frame = 3
Query:  114 LLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-------------QSHFVVELTYNYGV---TSYDIGT-------GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELI---------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYA--EEDQT----TVLELTYNYG 683
            L H   RV D  RT+KFYTE FGMKLL ++D  E K+S  FL F  +              +H V+ELT+N+G      Y I         GFGH   +  D+ K  E + ++G    +     +G    IAF   PDGY  ELI          +G         M+R+ +  RS++FY+  LGMKLLRT +    K+TL  LGY   + D      +VLELT+N+G
Sbjct:   23 LNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYKINNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREGQEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWG 248          

HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  120 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------HFVVELTYNYGVTS-----YDIGT----GFGHFAIATEDVYKLVENIRAK-GGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG 488
            H + R+ +  R+++FY    GMKLLR  +    K++  FLG+G  ++        V+ELT+N+G  +     Y  G     G+GH  I+ +D   L + I  K G  +   P   +G   +IAF+KDPDGY  E++  G
Sbjct:  185 HTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVVPHG 323          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23
Identity = 79/223 (35.43%), Postives = 114/223 (51.12%), Query Frame = 3
Query:  111 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTVLELTYNYG 683
            +L H + RV DLD+++KFYTE FGMKL+ +    E ++S +FL F        G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D   SI FYEK LGMK++   D P  K+T   L Y  +    D+  +LELT+N+G
Sbjct:   11 KLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLS--DGKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNWG 229          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: GLOD4_RAT (Glyoxalase domain-containing protein 4 OS=Rattus norvegicus GN=Glod4 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 3
Query:  108 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 698
            RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  R   P+      +   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ ++    A+LGYA  D    LEL    G  +++
Sbjct:    4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV----------SNARRLEWPLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKW----ALLGYA--DDQCKLELQGIQGAVDHS 196          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: GLOD4_MOUSE (Glyoxalase domain-containing protein 4 OS=Mus musculus GN=Glod4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19
Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  108 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 695
            RR LH V++V +  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  +   P+      I   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ +     A+LGYA  D    LEL    G  ++
Sbjct:    4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAV----------SNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQ----RALLGYA--DNQCKLELQGIQGAVDH 195          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEBR (Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19
Identity = 60/188 (31.91%), Postives = 97/188 (51.60%), Query Frame = 3
Query:  111 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 641
            R LH V++V +  +TI FYT+   MK+LR  +             +E++S   +G+G E  HFV+ELTYNY +  Y++G  +    I ++ ++  +  I  +           K G   +A VKDPDG+ F++ +    P+ L +V L VGDL +S K++ + LGM ++      E K T   L + E
Sbjct:    4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFDKISRIDHR-----------KSGCGRLA-VKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNELLGMGIV------EEKKTRVRLSFGE 172          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEEL (Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  111 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 584
            R LH V++V +  +TI F+T    MK+LR  +  +            ++S   +G+G E  HFV+E+TYNY +  Y++G  +    I ++ +++ VE I  +           K G   +A VKDPDG+ F++ +   +P+ L +V + VGDL +S K++ + LGM ++
Sbjct:    4 RALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-----------KSGCGRLA-VKDPDGHEFKIGKADQSPKVL-RVQVNVGDLEKSKKYWNETLGMPIV 159          
BLAST of FC875689 vs. ExPASy Swiss-Prot
Match: GLOD4_HUMAN (Glyoxalase domain-containing protein 4 OS=Homo sapiens GN=GLOD4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 64/205 (31.22%), Postives = 91/205 (44.39%), Query Frame = 3
Query:  108 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------------------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 641
            RR LH V++VG+  +T +FY +  GMK+        E                          K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+               N  +   P+      +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +K E K   A+LGYA+
Sbjct:    4 RRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSFSKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV----------SNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKI---YEKDEEKQR-ALLGYAD 194          
The following BLAST results are available for this feature:
BLAST of FC875689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_HAEIN2.673e-3655.30Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_NEIMB6.161e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA6.161e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_YEAST1.244e-2535.96Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
LGUL_SCHPO4.426e-2335.43Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
GLOD4_RAT2.429e-2131.58Glyoxalase domain-containing protein 4 OS=Rattus n... [more]
GLOD4_MOUSE1.020e-1931.25Glyoxalase domain-containing protein 4 OS=Mus musc... [more]
GLOD4_CAEBR6.614e-1931.91Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 ... [more]
GLOD4_CAEEL2.513e-1831.36Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 P... [more]
GLOD4_HUMAN1.801e-1631.22Glyoxalase domain-containing protein 4 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC31401G03EF CTVClemen1 Citrus clementina cDNA clone C31401G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875689 ID=FC875689; Name=FC875689; organism=Citrus clementina; type=EST; length=712bp
GACTTGCGACTTCACTCCGACTTTCTGAGTGATTCCATATCAAAATGGCT
GAGGCTTCTCCTGCTGCTGCTAATGCCGAGTTGCTGGAATGGCCAAAGAA
AGATAAGCGACGCCTCCTTCATGCTGTGTATCGTGTTGGTGATCTTGATC
GCACCATCAAATTTTACACCGAATGCTTTGGGATGAAGCTGTTGAGAAAG
AGAGACGTCCCGGAAGAGAAATACTCAAATGCCTTTCTTGGATTTGGCCC
CGAACAGTCTCACTTTGTTGTGGAGTTAACGTACAACTATGGTGTAACTT
CATATGATATTGGAACTGGTTTTGGCCATTTTGCAATTGCAACTGAAGAT
GTTTACAAACTGGTTGAAAACATTCGTGCCAAGGGTGGCAATGTCACTAG
AGAGCCTGGTCCAGTTAAAGGTGGAACAACTCACATTGCCTTTGTGAAGG
ATCCCGATGGTTATATTTTTGAACTCATCCAGAGAGGTCCAACTCCTGAA
CCACTCTGTCAAGTAATGCTTCGCGTTGGCGATCTTGGTCGCTCCATCAA
GTTCTATGAAAAGGCTTTGGGGATGAAACTGTTAAGGACAGTTGATAAAC
CTGAATACAAGTACACCCTGGCCATGCTTGGATATGCTGAGGAAGATCAG
ACTACTGTTCTGGAGTTAACTTATAATTATGGGGTGACTGAATATACCAG
GGNAATGCATAT
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