FC875695

Overview
NameFC875695
Unique NameFC875695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7316 contig Ccv1_Contig7316:732..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 9.185e-95
Identity = 166/231 (71.86%), Postives = 195/231 (84.42%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTR-VPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTNRIICP 690
            EG P SGSVQAILDWQRRTM+MMY D+  AL AK I  DPR+YLTFFCLGNREVK +GEYEPA RP D +DY +AQ+ARRFMIYVH+KMMIVDDEYII+GSANINQRSM+G RD+EIAMG +QP HL+T+ + ARGQIHGFRMSLWYEHLGML D FL PES ECV++VN++A++YWDLY+S+ L  DLPGHLL YP+ V+ EG VTELPG +FFPDT+A V+GT   + P
Sbjct:  583 EGPPASGSVQAILDWQRRTMEMMYYDIAVALEAKRINADPRDYLTFFCLGNREVKLNGEYEPAGRPLDGTDYAKAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAFQPCHLNTKGLVARGQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGTKGNLPP 813          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.424e-79
Identity = 147/227 (64.76%), Postives = 172/227 (75.77%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESL--EHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLG 669
            EG P S SVQAILDWQRRTM+MMY D++ ALR KG+  +PR+YLTFFCLGNRE  + GEY P E+PE +SDY RAQE+RRFMIYVH+KMMIVDDEYIIIGSANINQRSM+G RDTEIAMG YQP HL +    R  GQI  FR+SLW EHL +  + F  PES EC++ VN  A+  W LYS++      DLPGHLL YPI +   G+VT L GTEFFPDT A+V+G
Sbjct:  582 EGKPGSASVQAILDWQRRTMEMMYTDIIIALRKKGLDANPRDYLTFFCLGNREKGKVGEYLPPEKPEANSDYARAQESRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVG 808          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 229.95 bits (585), Expect = 9.594e-60
Identity = 119/232 (51.29%), Postives = 155/232 (66.81%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIME--DPRNYLTFFCLGNRE----VKRSGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 672
            EG P   + Q IL WQ +T+ MMY+ + +AL   G+     P++YL FFCLGNRE    +  SG   P  R       P ++++RRFM+YVH+K M+VDDEY++IGSANINQRSMEG RDTEIAMG YQP H   R  +  RGQI+G+RMSLW EH+  LDD F QPES ECV+KV  + ER W  +++E +  D+ GHLL+YP+ V  +G V  LPG+E FPD    ++GT
Sbjct:  729 EGVPTGAATQRILYWQHKTIQMMYETIYKALVETGLEGAFSPQDYLNFFCLGNREMVDGIDNSGTGSP--RQMQTLLRPLSRKSRRFMVYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGERNWKQFAAEEVS-DMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGT 957          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.253e-59
Identity = 115/229 (50.22%), Postives = 155/229 (67.69%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMED--PRNYLTFFCLGNRE-VKRSGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 672
            EG P   + Q IL WQ +TM MMY  +  AL   G+ ++  P++YL FFCLGNRE V  + E        +++     +++RRFMIYVH+K M+VDDEY++IGSANINQRSMEG RDTEIAMG YQP H   R  +  RGQI+G+RMSLW EH+ +LDD F++PES  CV+KV  +AE  W+ + SE +  ++ GHL++YP+ V  +G V  LPG+E FPD    V+G+
Sbjct:  678 EGVPTGAATQRILYWQHKTMQMMYGTIYNALVEAGLEDEYSPQDYLNFFCLGNREMVNGNNESGTGSASNENTPQGLCRKSRRFMIYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEENWEQFRSEEVS-EMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGS 905          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.121e-59
Identity = 115/240 (47.92%), Postives = 163/240 (67.92%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGI--MEDPRNYLTFFCLGNREVKR--------SGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTNRII 684
            EG P S  +Q IL WQ +TM MMY+ + +AL   G+    +P+++L FFCLG REV          S    P + P+ ++   +A ++RRFMIYVH+K M+VDDE+++IGSANINQRS+EG RDTEIAMGGYQP+H   +  +  RGQI G+RMSLW EHLG L+  F +PE+ ECV++V Q++E  W  Y++E +  ++PGHLL+YP+ V   G V+ LPG E FPD   +++G+  ++
Sbjct:  622 EGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDGQLEPQDFLNFFCLGTREVGTREVPDGTVSVYNSPRKPPQLNAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWRQYAAEEVT-EMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGSFLVV 860          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 1.385e-58
Identity = 114/236 (48.31%), Postives = 161/236 (68.22%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGI--MEDPRNYLTFFCLGNREVKRSGEYE--------PAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 672
            EG P S  +Q IL WQ +TM MMY+ + +AL   G+    +P+++L FFCLGNREV      +        P + P+ ++   +A ++RRFMIYVH+K M+VDDE+++IGSANINQRS+EG RDTEIAMGGYQP+H   +  +  RGQI G+RMSLW EHLG L+  F +PE+ ECV++V Q++E  W  Y++E +  ++ GHLL+YP+ V   G V+ LPG E FPD   +++G+
Sbjct:  612 EGAPTSKPIQRILYWQHKTMQMMYQTIYKALLEVGLDGQLEPQDFLNFFCLGNREVGTREVPDGTVNVYNCPRKPPQPNAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWGQYAAEEVT-EMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGS 846          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.297e-56
Identity = 114/235 (48.51%), Postives = 160/235 (68.09%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIME--DPRNYLTFFCLGNREVKR---SGEYEPAERPEDDSDYPRAQ----EARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 672
            EG P S  +Q IL WQ +TM MMY+ + +AL   G+    +P+++L FFCLG REV     S    P + P+ +++   AQ    ++RRFMIYVH+K M+VDDE+++IGSANINQRS+EG RDTEIAMGGYQP++      +R  GQI G+RMSLW EHLG L+  F +PE+ ECV++V Q++E  W  Y++E +  ++ GHLL+YP+ V   G V+ LPG E FPD   +++G+
Sbjct:  615 EGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDSQFEPQDFLNFFCLGTREVPVGTVSVYNSPRKPPQPNANANAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSELNWRQYAAEEVT-EMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGS 848          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.445e-55
Identity = 116/234 (49.57%), Postives = 148/234 (63.25%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLG---MLDD-TFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTNRIICP 690
            EG PES +V+ IL W R TM MMY+ + +A+   G    PR+YL FFCL NRE KR GE+E    P   + Y  AQ  RRFM+YVH+K+MIVDD YI+IGSANINQRSM+G RDTEIA+G YQ     T      +I  +R+SLWYEH G     DD +  +PES ECV+ +  I E+ W++YS + +   L  HL+ YPI V+G+G V E+ G   FPDTK  V G    + P
Sbjct:  530 EGPPESETVEEILHWTRETMSMMYQIIGEAIWEVGDKSHPRDYLNFFCLANREEKRDGEFEAVSSPHQKTHYWNAQRNRRFMVYVHSKLMIVDDTYILIGSANINQRSMDGCRDTEIAIGCYQ-----TNTNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVRGLRTIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEV-GDGCFPDTKTLVKGKRSKMFP 757          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.289e-53
Identity = 113/233 (48.50%), Postives = 147/233 (63.09%), Query Frame = 1
Query:    1 EGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHL---STRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTNRIICP 690
            EG P+SG VQ IL WQ +TM MMY  + + L+A      P +YL F+CLG RE  +  +  PA      SD   +   +RFMIYVHAK MIVDDEY+++GSANINQRSM G +DTEIAMG YQP H      R P RGQ++G+RMSLW EHLG   D F++P   EC+KKVN I+E  W  +       +L GHL++YP+ V  +G V+ LP  E FPD   +++G + +  P
Sbjct:  638 EGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDAHPLDYLNFYCLGKRE--QLPDDMPATNGSVVSD---SYNFQRFMIYVHAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHP-RGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFS-ELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALP 863          
BLAST of FC875695 vs. ExPASy Swiss-Prot
Match: PLD_PHYIN (Phospholipase D OS=Phytophthora infestans GN=PLD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 52/155 (33.55%), Postives = 76/155 (49.03%), Query Frame = 1
Query:   13 ESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYPRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAM----GGYQPYHLSTRVPARG-QIHGFRMSLWYEHLGMLDD 462
            E  ++ A++ WQ  T+      + +AL  KG+   P NY+ FF L    +  +G                   A    IY+H+K+MI DD   I+GSANIN RSM G RD+EIA+      Y+   ++ +   RG      R+ L+ EHLG+ DD
Sbjct: 1193 ELTNLHAVMHWQFATICRGRYSLFEAL--KGVTNHPENYVAFFGLRKYGIMPNGC------------------AATEQIYIHSKLMIADDRCAILGSANINDRSMNGDRDSEIALVIEDMQYEDGVMNEKPYRRGVAASKLRLQLFREHLGLADD 1327          
The following BLAST results are available for this feature:
BLAST of FC875695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PLDA2_ORYSJ9.185e-9571.86Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDZ1_ARATH1.424e-7964.76Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDB1_ARATH9.594e-6051.29Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH1.253e-5950.22Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG3_ARATH8.121e-5947.92Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH1.385e-5848.31Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDG1_ARATH1.297e-5648.51Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDE1_ARATH2.445e-5549.57Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH2.289e-5348.50Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLD_PHYIN1.960e-1233.55Phospholipase D OS=Phytophthora infestans GN=PLD P... [more]

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Properties
Property NameValue
Genbank descriptionC31401G09EF CTVClemen1 Citrus clementina cDNA clone C31401G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875695 ID=FC875695; Name=FC875695; organism=Citrus clementina; type=EST; length=691bp
GAGGGGTTTCCAGAGTCTGGTTCAGTTCAGGCAATATTAGATTGGCAGAG
AAGGACAATGGATATGATGTATAAGGATGTTGTTCAGGCTCTTAGAGCAA
AGGGCATTATGGAAGATCCCAGGAACTATTTGACATTCTTCTGCCTTGGG
AATCGGGAGGTGAAGAGGAGTGGTGAATATGAACCTGCAGAAAGGCCGGA
GGATGATTCAGACTATCCTAGAGCTCAGGAAGCTCGACGCTTCATGATCT
ACGTTCATGCCAAGATGATGATTGTTGATGACGAATACATTATAATTGGA
TCTGCCAACATCAACCAGCGATCAATGGAGGGTGCCAGGGACACTGAGAT
AGCCATGGGAGGCTACCAACCATATCATTTGTCAACCAGGGTGCCAGCAC
GAGGCCAGATACACGGCTTCCGTATGTCACTATGGTACGAGCACCTAGGC
ATGCTCGATGACACCTTCCTCCAGCCAGAAAGTAGCGAATGTGTTAAGAA
GGTTAACCAGATTGCCGAACGGTATTGGGACCTGTACTCCAGTGAGTCTC
TTGAGCATGACTTGCCCGGTCACTTGCTCCGCTACCCCATTGGTGTTTCT
GGTGAAGGAGATGTCACGGAGTTGCCAGGAACCGAGTTCTTCCCCGACAC
CAAGGCTCGTGTTCTCGGTACCAATCGGATTATATGCCCCC
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