FC875697

Overview
NameFC875697
Unique NameFC875697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.430e-47
Identity = 92/202 (45.54%), Postives = 129/202 (63.86%), Query Frame = 2
Query:   53 ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            ER YSL  + K L  + +G+S AP +L +    LM +W  + +AVLD  + PF K +G   + Y+G  P  N +    MS  +   M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDLP V+ +APS PGV  +GGDMF S+P ADAIFMKW+   W+DD C  +++NCY+ALPA GK+I  E +LP+
Sbjct:   99 ERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGV-PFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPE 298          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.070e-47
Identity = 99/228 (43.42%), Postives = 135/228 (59.21%), Query Frame = 2
Query:    2 RLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDS 664
            RLL SY + +    +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E   PV PD S
Sbjct:   82 RLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTS 307          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.687e-46
Identity = 97/228 (42.54%), Postives = 137/228 (60.09%), Query Frame = 2
Query:    2 RLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDS 664
            RLL SY +      +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDLP V+A+AP+ PGV ++GGDMF S+P ADA+FMKW+   W+D+ C  +++NCY ALP  GK+I  E   PV PD S
Sbjct:   81 RLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTS 306          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.687e-46
Identity = 95/222 (42.79%), Postives = 133/222 (59.91%), Query Frame = 2
Query:    5 LLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            LL SY V +    E  +   ER Y L  + K L+ +  G+S AP +L +    LM +W  + + VLD  I PF K +G  A+ Y+GK    N +    M   S   M  +++ Y+GF G+K LVDVGG  G  L MI  KH  + +GINFDLP V+A+A +  G+ H+GGDMF+S+P  DAIFMKW+L  W+D  C  +++NCYK+LP  GK+I  E +LP+
Sbjct:   74 LLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGI-PFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSL-KGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPE 293          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.687e-46
Identity = 98/228 (42.98%), Postives = 135/228 (59.21%), Query Frame = 2
Query:    2 RLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDS 664
            RLL SY + +    +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E   PV PD S
Sbjct:   82 RLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTS 307          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.687e-46
Identity = 100/233 (42.92%), Postives = 138/233 (59.23%), Query Frame = 2
Query:    2 RLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDSTRVRD 679
            RLL SY V +       +   ER Y L  + K LV + +G+S A   L +    LM +W  + +AVL+  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G++ +VDVGG  G  L MI+ K+P + +GINFDLP V+ +AP +PGV H+GGDMF S+P  DAIFMKW+   W+DD C   ++NCY ALP  GK+I  E   PV PD S   ++
Sbjct:   83 RLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGI-PFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSM-KGINFDLPHVIEDAPPLPGVKHVGGDMFVSVPKGDAIFMKWICHDWSDDHCAKFLKNCYDALPNIGKVIVAECVLPVYPDTSLATKN 313          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.985e-46
Identity = 96/222 (43.24%), Postives = 131/222 (59.01%), Query Frame = 2
Query:    2 RLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 655
            RLL SY V +    E  +   ER Y L  + K L  + +G+S AP  L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  + + Y GF+ +  +VDVGG  G  L MI+ K+P I +GINFDLP V+ +AP  PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP
Sbjct:   87 RLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSI-KGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILP 306          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.817e-46
Identity = 100/228 (43.86%), Postives = 135/228 (59.21%), Query Frame = 2
Query:    2 RLLTSYGV--FSEHREFGG--ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDS 664
            RLL SY +  +S      G  ER Y L  + K L  + EG+S AP  L +    L+ +W  + +AVL+  I PF K +G  A+ Y+G  P  N +  + M+  S   M  +L+ Y GF+G+  +VDVGG  G  L MI+ K+P I +GINFDLP V+ +AP  PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E   PV PD S
Sbjct:   82 RLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSI-KGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSS 307          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.021e-45
Identity = 95/220 (43.18%), Postives = 129/220 (58.64%), Query Frame = 2
Query:    2 RLLTSYGVFS-EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            RLL+ Y V +   R    +R Y L  + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  ++ Y+G  P  N +  + MS  S   M  V   Y GF+G+  LVDVGG  G  L MIL K+P I   INFDLP V+ +AP  PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP+
Sbjct:   61 RLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTI-RCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPE 278          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.021e-45
Identity = 97/228 (42.54%), Postives = 136/228 (59.65%), Query Frame = 2
Query:    2 RLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDS 664
            RLL SY +      +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDLP V+A+AP+ PGV ++GGDMF S+P ADA+FMKW+   W+D+ C   ++NCY ALP  GK+I  E   PV PD S
Sbjct:   81 RLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTS 306          
The following BLAST results are available for this feature:
BLAST of FC875697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
COMT1_CAPCH2.430e-4745.54Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_POPTM7.070e-4743.42Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT3_POPKI2.687e-4642.54Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_ZINEL2.687e-4642.79Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_POPKI2.687e-4642.98Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_EUCGU2.687e-4642.92Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_CLABR5.985e-4643.24Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_PRUDU7.817e-4643.86Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
OMT1_CHRAE1.021e-4543.18Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT2_POPTM1.021e-4542.54Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]

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Properties
Property NameValue
Genbank descriptionC31401G11EF CTVClemen1 Citrus clementina cDNA clone C31401G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875697 ID=FC875697; Name=FC875697; organism=Citrus clementina; type=EST; length=688bp
CCGCTTGCTCACCAGCTACGGCGTGTTCTCGGAGCATCGCGAGTTTGGAG
GCGAAAGGAAGTACAGCCTCACCGAGATCGGGAAATCCCTCGTTACTGAT
GCCGAGGGTCTATCGTACGCGCCCTACGTGCTCCAGCATCACCAGGACGC
GCTTATGAGCGCGTGGCCTTTGGTGCACGAGGCCGTTCTGGACCCAACTA
TTGAGCCATTTGTGAAAGTCCATGGCGAGCCGGCATATAGTTATTATGGG
AAGAAGCCTGAAATGAACGGCTTGATGCGAAAAGCCATGTCGGGAGTGTC
CGTGCCGTTCATGACGTCCGTTTTGGACGGTTACGATGGGTTCAAAGGTG
TGAAGCGATTGGTTGATGTGGGTGGGAGTGCAGGTGATTGCCTGAGGATG
ATATTACAGAAACATCCTTTTATATGTGAAGGGATCAATTTTGATTTGCC
TGAGGTTGTTGCCGAAGCTCCAAGTATCCCTGGAGTGACCCATATTGGTG
GGGACATGTTTAAGTCCATTCCTGCCGCTGATGCTATCTTTATGAAGTGG
GTTTTAACTACATGGACTGACGATGAATGCAAGCTGATAATGGAGAACTG
TTACAAGGCTCTTCCGGCAGGAGGAAAACTGATTGCTTGTGAGCCCGTGC
TGCCTGATGATTCAACGAGAGTCAGAGACGCGTGCTCT
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