FC875698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 71/168 (42.26%), Postives = 100/168 (59.52%), Query Frame = 3 Query: 189 YVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLS-----VYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFE 677 YVKLGYHYLI H L +P++ ++F V LS L +L+ ++ GF +F TL+ V+FMSRPRS+YL+D++CY PP KV+ ++F+ + E SL+FQR+I+ SG+G+ETY+P + S TM R EA V+FGALD LFE Sbjct: 15 YVKLGYHYLITHFFKLMFLPLMAVLFM-NVSLLSLNHL--QLYYNST-------GF--IFVITLAIVGSIVFFMSRPRSIYLLDYSCYLPPSSQKVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYLPDSIHSIPPR-PTMAAAREEAEQVIFGALDNLFE 169
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20 Identity = 54/170 (31.76%), Postives = 95/170 (55.88%), Query Frame = 3 Query: 183 LKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTRE------QFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELF 674 +K VK+ ++YL+ H L +P L++ + E LS ++L + + +++ S+ FF A ++Y M+RP+ VYLVDF+CY PP LK + + + + AG W + + +DF +I++ SG+G ETY+P+ + + + R+E V+ GA+D LF Sbjct: 5 MKKVKIFFNYLMAHRFKLCFLP-LMVAIAVEASRLSTQDL-QNFYLYLQNNHTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSHLKASTQRIMQHVRLVREAGAWKQESDYLMDFCEKILERSGLGQETYVPEGLQTLPLQ-QNLAVSRIETEEVIIGAVDNLF 171
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 61/180 (33.89%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 168 LQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKS----------DEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFE 677 + SVN VKL Y Y++ + L P L + + L+ +L L +H+L +V F F L +Y ++RP VYLVD++CY PP LKV+ + +++ + K+ D +SLDF R+I + SG+GDETY P+ ++ T R E V+ GAL+ LFE Sbjct: 1 MTSVN---VKLLYRYVLTNFFNLCLFP-LTAFLAGKASRLTINDLHNFL-SYLQHNLITVTLLFAFTVFGLVLYIVTRPNPVYLVDYSCYLPPPHLKVSVSKVMDIFYQIRKADTSSRNVACDDPSSLDFLRKIQERSGLGDETYSPEGLIHVPPR-KTFAASREETEKVIIGALENLFE 174
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 52/162 (32.10%), Postives = 87/162 (53.70%), Query Frame = 3 Query: 228 IYLATIPVLLLVFSAEVGS-LSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFI-------EVAGKW-SKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHG----RLEASMVMFGALDELF 674 ++ + + L+ A GS ++ E+L + T+++L ++ + F +Y ++RP+ VYLVDF+CY PP LKV+ + + E W +K + +DFQ +I++ SG+G ETYIP+ + C ++ G R E V+FGALD LF Sbjct: 7 VFFKILFISLMAGLAMKGSKINVEDLQKFSLHHTQNNLQTISLLLFLVVFVWILYMLTRPKPVYLVDFSCYLPPSHLKVSIQTLMGHARRAREAGMCWKNKESDHLVDFQEKILERSGLGQETYIPEGL-----QCFPLQQGMGASRKETEEVIFGALDNLF 163
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 387 YFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680 Y +R + VYLVDF+C++P D K++ E F +A E ++ F RI+ SG+GD+TY P+ ++++ +M R E+ +V+FGAL+ LF++ Sbjct: 52 YSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPT-PSMYEARHESELVIFGALNSLFKK 148
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13 Identity = 35/98 (35.71%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 387 YFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680 Y +R + VYLVDF+C++P D K++ E F +A + ++ F RI+ SG+GD+TY P+ ++++ +M R E+ +V+FGAL+ LF++ Sbjct: 52 YSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTDETIQFMTRILNRSGLGDDTYSPRCMLTSPPT-PSMYEARHESELVIFGALNSLFKK 148 The following BLAST results are available for this feature:
BLAST of FC875698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875698 ID=FC875698; Name=FC875698; organism=Citrus clementina; type=EST; length=692bpback to top |