FC875702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.307e-41 Identity = 81/161 (50.31%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 179 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R RE+AAFF QT ETTGGW AP G +AWGYC ++EI+P P YYGRGPIQLT YNY ++DPV++F++AIWFWMTAQ P Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------PYYGRGPIQLTHKYNYQ--LAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSP 174 HSP 2 Score: 28.4906 bits (62), Expect = 5.307e-41 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VIT++W Sbjct: 175 KPSCHDVITNQW 186
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.525e-40 Identity = 76/166 (45.78%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 194 SREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCN----LNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWM----TAQPPSH 667 + MFE +LP RN+ CP +GFYTYDA+ A + +P FG +G++ R RE+AAFFAQT +ET+G + WGYC ++E++P S YC+ +YPC YYGRGP+QL WNYNY C ATDPVLSF++A+WFWM T P H Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC--GNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCH 231 HSP 2 Score: 28.1054 bits (61), Expect = 1.525e-40 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 664 PSCHEVITDEW 696 PSCHEVIT EW Sbjct: 228 PSCHEVITGEW 238
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.191e-39 Identity = 81/174 (46.55%), Postives = 101/174 (58.05%), Query Frame = 2 Query: 161 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPS--PYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 G+ G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + RE+AAF AQT ETTGGW AP G YAWGYCF E + YC + +PC KYYGRGPIQL++N+NY A+D +SF +A WFWMT Q P Sbjct: 75 GSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSP 246 HSP 2 Score: 24.6386 bits (52), Expect = 6.191e-39 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH V T +W Sbjct: 247 KPSCHAVATGQW 258
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.374e-38 Identity = 81/172 (47.09%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 161 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 670 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT ET GG G + GYCF+ +I +YYGRGPIQLT NY R ATDP++SFK+AIWFWMT Q PS H Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCH 177 HSP 2 Score: 24.6386 bits (52), Expect = 1.374e-38 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VI +W Sbjct: 173 KPSCHNVIIGQW 184
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.374e-38 Identity = 81/172 (47.09%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 161 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 670 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT ET GG G + GYCF+ +I +YYGRGPIQLT NY R ATDP++SF++AIWFWMTAQ PS H Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCH 177 HSP 2 Score: 24.6386 bits (52), Expect = 1.374e-38 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VI +W Sbjct: 173 KPSCHNVIIGQW 184
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.087e-36 Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 2 Query: 155 GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL---NYPC-RGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 670 G+ + I+S +++ L +++D CPARGFYTY +F+ AA FP F +G R RE+AAF AQ ETTGGW AP G YAWG C+ EI+P S YC+ +PC GK Y+GRGPIQ++WN+NY +D ++F++A+WFWMT + PS H Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSD--IAFQTALWFWMTPRDTKPSCH 217 HSP 2 Score: 24.2534 bits (51), Expect = 2.087e-36 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 658 TKPSCHEVITDEW 696 TKPSCH+V+ E+ Sbjct: 212 TKPSCHQVMVGEY 224
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.022e-35 Identity = 80/172 (46.51%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 161 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 670 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT ETTGG A G +A GYCF+ E +YGRGPIQLT NY ATD +SFK+AIWFWMTAQ PS H Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVRE----------GNQMGSGFYGRGPIQLTGQSNY--DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCH 171 HSP 2 Score: 27.7202 bits (60), Expect = 1.022e-35 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VIT +W Sbjct: 167 KPSCHDVITGQW 178
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.436e-34 Identity = 85/191 (44.50%), Postives = 106/191 (55.50%), Query Frame = 2 Query: 119 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEI----SPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 670 C + + +G G +G +I++ +F +LP R++ +CPARGFYTYDAFI AA +FPAFG SG + RE+AAFF QT ETTGG R + ++ WGYCF EI SPP YYGRGPIQLT NY +TD V+SFK+AIWFWMTAQ PS H Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-------------YYGRGPIQLTGQSNYQAA--GNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCH 186 HSP 2 Score: 24.6386 bits (52), Expect = 1.436e-34 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VI W Sbjct: 182 KPSCHDVILGRW 193
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 4.135e-34 Identity = 80/172 (46.51%), Postives = 96/172 (55.81%), Query Frame = 2 Query: 161 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 670 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T R +EIAAFF QT ETTGG +P G YA GYCF+ E YYGRGPIQLT NY ATD +SFK+AIWFWMT Q PS H Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLRE----------GNQMGNGYYGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCH 178 HSP 2 Score: 26.9498 bits (58), Expect = 4.135e-34 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VIT W Sbjct: 174 KPSCHDVITGRW 185
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 2.012e-33 Identity = 76/180 (42.22%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 122 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT ET G W A G +Y WGYC + NYNY C TDP ++FK+A+WFWMT Q P Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDLNLPLLQEPELVE--TDPFIAFKTALWFWMTPQSP 213 HSP 2 Score: 26.9498 bits (58), Expect = 2.012e-33 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VIT+ W Sbjct: 214 KPSCHAVITESW 225 The following BLAST results are available for this feature:
BLAST of FC875702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875702 ID=FC875702; Name=FC875702; organism=Citrus clementina; type=EST; length=696bpback to top |