FC875704

Overview
NameFC875704
Unique NameFC875704
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPY (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPS (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPP (Chaperone protein dnaJ OS=Yersinia pestis (strain Pestoides F) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPN (Chaperone protein dnaJ OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPG (Chaperone protein dnaJ OS=Yersinia pestis bv. Antiqua (strain Angola) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPE (Chaperone protein dnaJ OS=Yersinia pestis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPB (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPA (Chaperone protein dnaJ OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V  DA E EI+  Y RLA+K+HPD+Q +   A  +F+E  EAY++L+D  KR  YD  G
Sbjct:    4 RDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_PICTO (Chaperone protein dnaJ OS=Picrophilus torridus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYY IL VD +A++++I+  +  LA K+HPD       A  +F+EI EAY+VLSDP KR++YD  G
Sbjct:    3 KDYYAILGVDRNASQDDIKKAFRELAKKYHPDANPGNKEAEEKFKEIAEAYEVLSDPQKRKQYDETG 69
[Close]
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTSZ (Chaperone protein dnaJ OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3 
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY+IL V+  A E+ I+  Y RLA+K+HPD+ K    +  +F+EINEAY++LSD  KR  YD  G
Sbjct:    4 QDYYEILGVERGADEKAIKKAYKRLAMKYHPDRTKGDKTSEEKFKEINEAYEILSDKEKRAAYDQYG 70
The following BLAST results are available for this feature:
BLAST of FC875704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
DNAJ_YERPY7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_YERPS7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_YERPP7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pestis (strain ... [more]
DNAJ_YERPN7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pestis bv. Anti... [more]
DNAJ_YERPG7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pestis bv. Anti... [more]
DNAJ_YERPE7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pestis GN=dnaJ ... [more]
DNAJ_YERPB7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_YERPA7.512e-1247.76Chaperone protein dnaJ OS=Yersinia pestis bv. Anti... [more]
DNAJ_PICTO7.512e-1249.25Chaperone protein dnaJ OS=Picrophilus torridus GN=... [more]
DNAJ_ACTSZ7.512e-1249.25Chaperone protein dnaJ OS=Actinobacillus succinoge... [more]

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Properties
Property NameValue
Genbank descriptionC31401H06EF CTVClemen1 Citrus clementina cDNA clone C31401H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875704 ID=FC875704; Name=FC875704; organism=Citrus clementina; type=EST; length=696bp
GAAGCGCTTAAGCCTTTGTAACTAGTTTTGAGCTCTATTGTCTGTCTCGT
GTTTGTGTCCCCTCTACTACAGAGGTCATGATGTGGGACGAATGGGTCGA
TTGCAACAATAACGATGAACAAACACAACAGGATTCCCATATCAATTTTG
ATTTTCTTTCTCTTCTCGCCAAACCCAAGGATTATTATAAAATATTGGAA
GTTGATTACGATGCCACGGAGGAAGAAATTAGGTCCAATTACATTCGTCT
AGCGCTGAAATGGCACCCAGATAAGCAAAAGGATCGAGATTGTGCAACTT
CGAGATTTCAAGAGATAAACGAGGCTTACCAGGTTTTGAGCGATCCTGTC
AAAAGGAGAGAATATGACAGCAAAGGGATGTTGCACATATATGATCGCAA
CATAATTGAGTATCTTAATCGCTACAAGGGCTTAATATTAACTTGCAATG
GTCTTGGGATGAGGCATTCAATTGTGTAATATGTTGTCAGCACAGTTGGG
GCAGTTCATATTGGGAGGCATAGAATTACCAATGCTGCAAATAGCATTGA
GGGCATGGAGAATAGCAGTTAATATGTATTGCGATAACTTGAATGCCCTT
GTATAATAGAAACCAATGCTAAAACATCGTTGTGTAACAGCTAATGCCTG
CCAATTTGGGGTTACATTGTCCAAAAAAAAAAAAAAAAAAAAAAAA
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