FC876162

Overview
NameFC876162
Unique NameFC876162
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length361
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10311 contig Ccv1_Contig10311:2..362. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACAH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACAC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain A0248) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1
Query:   43 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNASVPA 360
            + +H +G+PR+G KRELKF LE +W G+SS   L+ + A+LR   W    +  +   P   F++YDQVLD +  LG +P R     G+   D YF +ARG ++  A
Sbjct:    2 VTTHNLGFPRIGAKRELKFGLERYWKGESSRGALKALGAELRQRHWNDQRD--LDLAPVGDFAFYDQVLDMSFTLGNLPKRVQGFHGD-ALDNYFRVARGRSAQSA 104          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACWK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K   E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKIDEEQFLTTMKEIRLQHVKVQQEKGIELIPVGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K   E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKIDEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACC4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain B4264) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K   E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKIDEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACC2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain G9842) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K   E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKIDEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_STRA5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype V GN=metE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.550e-15
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K A+E+FW G    +DL+K    LR +  K+  EAGI  IP   FS YD VLD +     +P R+  +  E   D+YF++ARG+
Sbjct:    7 LGYPRLGEQREWKQAIEAFWAGNLEQKDLEKQLKQLRINHLKKQKEAGIDLIPVGDFSCYDHVLDLSFQFNVIPKRF--DEYERNLDLYFAIARGD 100          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_STRA3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype III GN=metE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.550e-15
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K A+E+FW G    +DL+K    LR +  K+  EAGI  IP   FS YD VLD +     +P R+  +  E   D+YF++ARG+
Sbjct:    7 LGYPRLGEQREWKQAIEAFWAGNLEQKDLEKQLKQLRINHLKKQKEAGIDLIPVGDFSCYDHVLDLSFQFNVIPKRF--DEYERNLDLYFAIARGD 100          
The following BLAST results are available for this feature:
BLAST of FC876162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_BACAH3.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAC3.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAA3.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS35.015e-1539.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACWK5.015e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCR5.015e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC45.015e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC25.015e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA56.550e-1542.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA36.550e-1542.715-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32001A06EF DevOvary1 Citrus clementina cDNA clone C32001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876162 ID=FC876162; Name=FC876162; organism=Citrus clementina; type=EST; length=361bp
CTCGACTCTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATC
TCACATCGTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCG
CGTTGGAATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAG
GTGTCCGCTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGG
GATCAAATACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCG
ACACCACCGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGC
GGCGAGATTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTC
TGTTCCCGCTA
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