FC876165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 52/101 (51.49%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 K+GINGFGRIGRL NDPFI YM YMFKYD+ HG +K + V D TL K + VF R+P EIPWG G +YVVES+GVFT Sbjct: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFISTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWGSVGAEYVVESTGVFT 105
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTL-EINGK---LIKVFSKRDPAEIPWGDYGVDYVVESSGVFTT 669 VGINGFGRIGRL NDPFI YM Y+FKYDSTHG FKGT+ D + + +GK IKVF+ +DPA I WG D+VVES+GVFTT Sbjct: 6 VGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTT 109
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTL-EINGK---LIKVFSKRDPAEIPWGDYGVDYVVESSGVFTT 669 VGINGFGRIGRL NDPFI YM Y+FKYDSTHG FKGT+ D + + +GK IKVF+ +DPA I WG D+VVES+GVFTT Sbjct: 6 VGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTT 109
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21 Identity = 52/101 (51.49%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFK-GTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 K+GINGFGRIGRL NDPFI +YM YMFKYDS HG +K + V D TL K + VF R+P E PWG+ G +YVVES+GVFT Sbjct: 4 KIGINGFGRIGRLVARVALMSDDIELVAVNDPFITTEYMTYMFKYDSVHGQWKKDELKVKDSKTLLFGDKPLTVFGVRNPEEDPWGEAGAEYVVESTGVFT 104
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21 Identity = 52/101 (51.49%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 K+GINGFGRIGRL NDPFI YM YMFKYDS HG +K + V D TL K + VF R+P EIPWG+ G ++VVES+GVFT Sbjct: 7 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDSKTLLFGEKPVTVFGVRNPEEIPWGETGAEFVVESTGVFT 107
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 53/101 (52.48%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTL 672 VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG ++ ++D L ++ I VF P EIPWG G DYVVES+GVF ++ Sbjct: 6 VGINGFGRIGRLVLRACLQKGIKVVAI-NDPFIDLQYMVYMFKYDSTHGRYKGEVS-MEDGKLIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSI 104
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 52/101 (51.49%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTT 669 K+GINGFGRIGR+ ND ID +YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + WG GVD VE++G+F T Sbjct: 4 KIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHGRFDGTVEV-KDGNLVVNGKTIRVTAERDPANLNWGAIGVDIAVEATGLFLT 102
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 454 NDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLRR 678 NDPFID YM YMFKYDS HG F+G ++ D L INGK I VF++RDPA IPWG G YVVES+GVFTT+ + Sbjct: 12 NDPFIDLDYMVYMFKYDSVHGRFEGEVST-KDGKLVINGKAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEK 85
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 53/101 (52.48%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 KVGINGFGRIGRL NDPFI YM YMFKYDS HG K I + D+ TL + VF R+P EIPWG G D+VVES+GVFT Sbjct: 5 KVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQCKSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFT 105
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTT 669 KVGINGFGRIGR+ ND +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F T Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLT 102 The following BLAST results are available for this feature:
BLAST of FC876165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876165 ID=FC876165; Name=FC876165; organism=Citrus clementina; type=EST; length=690bpback to top |