FC876165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20 Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLRRLQ 684 ++ INGFGRIGRL NDPFI Y AYM KYDSTHG +KGT++ DD + I+G I + +RDPA +PWG +D V+S+GVF L Q Sbjct: 3 RIAINGFGRIGRLVLRLALQRKDIEVVAVNDPFISNDYAAYMVKYDSTHGRYKGTVS-HDDKHIIIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQ 107
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19 Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLRR 678 V INGFGRIGRL NDPF+ YM YM +YD+ HG F G+++ D++ + +NGK I+VF++ +P I WG+ V YVVES+G FTTL + Sbjct: 3 VAINGFGRIGRLVLRASAKNPLINIVAINDPFVSTTYMEYMLEYDTVHGKFDGSLSH-DETHIFVNGKPIRVFNEMNPENIKWGEEQVQYVVESTGAFTTLEK 104
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTT 669 K+GINGFGRIGR+ + ++ Y+AYM KYDS HG F G ++V D +TL +NGK I++ + +DPAE+ WG+ G D VVES+G+F T Sbjct: 4 KIGINGFGRIGRMVFRAAIANFKDIEVVAINDLLEPDYLAYMLKYDSVHGRFDGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLT 103
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 454 NDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLRR 678 NDPFID YM YMFKYDS HG F G++ D L IN K I VF KRDP +IPWG G +Y+VES+GVFTT + Sbjct: 11 NDPFIDLAYMVYMFKYDSVHGRFSGSVET-KDGKLWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEK 84
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 50/99 (50.51%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVF 663 +VGINGFGRIGR+ ND +DA YMAYM KYDSTHG F+G + V L +NGK I+V S+RDPA + W + VD VVES+G+F Sbjct: 4 RVGINGFGRIGRVVFRAAQRRNDIEIVGIND-LLDADYMAYMLKYDSTHGRFEGAVEV-QGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLF 100
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_KLEPN (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Klebsiella pneumoniae GN=gap PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 49/98 (50.00%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 376 INGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTT 669 INGFGRIGR+ ND +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F T Sbjct: 1 INGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDGTVEV-KDGHLVVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLT 96
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19 Identity = 47/106 (44.34%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLRRLQ 684 +V INGFGRIGRL NDPFI Y AYMFKYDSTHG + G ++ DD + ++G I F +RDPA +PW +D ++S+GVF L Q Sbjct: 3 RVAINGFGRIGRLVMRIALQRKNVEVVALNDPFISNDYSAYMFKYDSTHGRYAGEVSH-DDKHIIVDGHKIATFQERDPANLPWASLNIDIAIDSTGVFKELDTAQ 107
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19 Identity = 51/115 (44.35%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 328 PPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTL 672 PP + VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KGT+ + L ++ I VF ++P EIPW G YVVE++GV+ ++ Sbjct: 88 PPPPPPPKPAKELTVGINGFGRIGRLVLRVCMEKGVRVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGTVE-HKNGRLVVDNLEINVFQCKEPKEIPWSSVGNPYVVEATGVYLSI 200
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTT 669 K+GINGFGRIGR+ ND I+ +Y+AYM KYDS HG F G I V+ + TL +NGK I++ +++DP + WGD +D V+ES+G+F T Sbjct: 4 KIGINGFGRIGRVLFRLAQLRSNIEILAIND-LINVQYIAYMLKYDSIHGNFNGKI-VIKNETLFVNGKKIRITNEKDPKNLMWGDLNIDVVIESTGIFLT 102
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTL 672 VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG++ + L ++ I V+ ++P +IPW D G YVVES+GV+ ++ Sbjct: 79 VGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGSVE-FRNGQLVVDNHEISVYQCKEPKQIPWRDVGSPYVVESTGVYLSI 177 The following BLAST results are available for this feature:
BLAST of FC876165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876165 ID=FC876165; Name=FC876165; organism=Citrus clementina; type=EST; length=690bpback to top |