FC876165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 TK+GINGFGRIGR ND DAK +A++ KYD+ HG ++ +++++ +NGK IKV ++RDPA++PW DYGV+ VVES+G FT Sbjct: 2 TKIGINGFGRIGRNVFRAALNNSEVEVVAIND-LTDAKTLAHLLKYDTVHGTLNAEVSA-NENSIVVNGKEIKVIAERDPAQLPWSDYGVEVVVESTGRFT 100
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 51/115 (44.35%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 328 PPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTL 672 PP +QK + VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG + + L ++ I + +DP EIPW G YVVE +GV+ ++ Sbjct: 98 PPPLQKPARE--LTVGINGFGRIGRLVLRVCMEKGIRVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGNVE-HKNGQLVVDNLEINTYQCKDPKEIPWSSIGNPYVVECTGVYLSI 208
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 52/125 (41.60%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 298 QPIRATATEIPPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTL 672 +PI+ PP + VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG + L ++ I VF + P EIPW G +VVE++GV+ +L Sbjct: 41 EPIKEEVPPPPPPPPAPKKVRELIVGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDLEYMVYMFKYDSTHGRYKGNVE-HKKGQLVVDNNEISVFQCKQPKEIPWKSVGSPFVVEATGVYLSL 163
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 TKV INGFGRIGRL ND DAK +A++FKYDS+ G F G I V + + + +NGK +KVF++ DP ++PWG+ G+D V+E +G FT Sbjct: 2 TKVAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRFNGEIEVKEGAFV-VNGKEVKVFAEADPEKLPWGELGIDVVLECTGFFT 100
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_CLOAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium acetobutylicum GN=gap PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 K+ INGFGRIGRL ND DAK +A++FKYDS+ G F G I V + + + +NGK +KVF++ DP ++PWGD G+D V+E +G FT Sbjct: 3 KIAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRFNGEIEVKEGAFV-VNGKEVKVFAEADPEKLPWGDLGIDVVLECTGFFT 100
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 51/120 (42.50%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 316 ATEIPPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLR 675 AT P + +R VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG++ + L ++ I V+ ++P +IPW G YVVES+GV+ +++ Sbjct: 63 ATPPPKMVSVARE---LTVGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGSVE-FRNGQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQ 177
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17 Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXX-NDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEI--NGKL--IKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLRRLQL 687 +VGINGFGRIGRL NDPFI MAY+FKYD+ HG F GT+ V + LEI NG + I V + ++PAEIPWG V+ V+ESSG FTT+ + L Sbjct: 4 RVGINGFGRIGRLVLRVLLSRGMPANVVLINDPFITTDAMAYIFKYDTVHGRFPGTV-VGKEGKLEITLNGHVYDIAVSACKNPAEIPWGASNVEVVIESSGAFTTMEKAHL 114
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17 Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 388 GRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 GRIGRL NDPFI YM YMFKYDS HG +K + V D+ TL K ++VF R+P EIPW + G D+VVES+GVFT Sbjct: 1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFT 94
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P_LACLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=gap PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTLRRLQ 684 KVGINGFGRIGRL ND D +A++ KYD+T G FKGT+ V +D ++NGK +KV ++R+P +I W D GV+ V+E++G F T + + Sbjct: 4 KVGINGFGRIGRLALRRIQEVEGVEVAHIND-LTDPAMLAHLLKYDTTQGRFKGTVEVKEDG-FDVNGKFVKVTAERNPEDIQWADSGVEIVLEATGFFATKEKAE 107
BLAST of FC876165 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 47/100 (47.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFT 666 KVGINGFGRIGRL ND + +AY+ KYDSTHG + + DD + I+G I S R+PAE+PWG G DYVVES+G+FT Sbjct: 5 KVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLRSQVEAKDDGIV-IDGHFIPCVSVRNPAELPWGKLGADYVVESTGLFT 102 The following BLAST results are available for this feature:
BLAST of FC876165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876165 ID=FC876165; Name=FC876165; organism=Citrus clementina; type=EST; length=690bpback to top |