FC876168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.098e-37 Identity = 66/104 (63.46%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 KKG WT EED IL Y++A+G+G W + K GL RCGKSCRLRW+NYL ++KRGN T +EE++II+LH LGNRWSLIA +PGRTDN++KNYWN+HLS+K+ Sbjct: 17 KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 120
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37 Identity = 67/117 (57.26%), Postives = 90/117 (76.92%), Query Frame = 3 Query: 165 MGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 MGRAPCC+K +KKG W+ EED L YI+ +G G +W +LP+ GL RCGKSCRLRW+NYLR ++K G + EEE II L+ ++G+RWS+IA+ +PGRTDN+IKNYWN+ L +K+ Sbjct: 1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL 117
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37 Identity = 71/144 (49.31%), Postives = 98/144 (68.06%), Query Frame = 3 Query: 165 MGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFWRPSSEKTLPVKVDVAAAGTGVAS 593 MGRAPCC+K +K+G W+ EED L YI+ G G +W +LP AGL RCGKSCRLRW+NYLR +++ G+ T EE+ II L AS+G+RWS+IA+++ GRTDN+IKNYWN+ L +K+ P L + ++A +S Sbjct: 1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIATMAPPPHHHLAIATSSSSASPSSSS 144
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37 Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 3 Query: 165 MGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFWRPSSEKTL------PVKVDV 566 MGRAPCC+K +K+G W+ EED L YI+ G G +W S P AGL RCGKSCRLRW+NYLR ++K G+ + EE+ II L A++G+RWS+IA+++PGRTDN+IKNYWN+ L +K+ + SS + P+ DV Sbjct: 1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSSSSDSSSSAMASPYLNPISQDV 141
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 L +G WT ED IL YI +GEG W +LP AGL RCGKSCRLRW NYLR +KRGNI+++EEE+II+LH LGNRWSLIA +PGRTDNEIKN+WNS+L +++ Sbjct: 14 LNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRL 118
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.214e-36 Identity = 64/104 (61.54%), Postives = 82/104 (78.85%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 KKG WT EED IL Y++ +G+G W + K GL RCGKSCRLRW+NYL ++ RGN T +EE++II+LH LGNRWSLIA +PGRTDN++KNYWN+HLS+K+ Sbjct: 13 KKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 116
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.028e-35 Identity = 64/105 (60.95%), Postives = 84/105 (80.00%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 +KKG W+ EED L +Y+ +NG+G W + KNAGL RCGKSCRLRWINYLR DLKRG + +EE++II+ H+ LGNRWS IA+ +PGRTDNEIKN+WNS + +++ Sbjct: 18 MKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRL 122
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35 Identity = 62/103 (60.19%), Postives = 84/103 (81.55%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSR 506 LKKG WT+ ED IL Y++ +GEG+W ++ KN GL RCGKSCRLRW N+LR +LK+G TAEEE +II+LH+ +GN+W+ +A+++PGRTDNEIKNYWN+ + R Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35 Identity = 62/103 (60.19%), Postives = 84/103 (81.55%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSR 506 LKKG WT+ ED IL Y++ +GEG+W ++ KN GL RCGKSCRLRW N+LR +LK+G TAEEE +II+LH+ +GN+W+ +A+++PGRTDNEIKNYWN+ + R Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35 Identity = 62/104 (59.62%), Postives = 81/104 (77.88%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 KKG WT EED+IL Y+ +G G W + + GL RCGKSCRLRW+NYL ++ +GN T +EE++II+LH LGNRWSLIA +PGRTDN++KNYWN+HLS+K+ Sbjct: 15 KKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118 The following BLAST results are available for this feature:
BLAST of FC876168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876168 ID=FC876168; Name=FC876168; organism=Citrus clementina; type=EST; length=720bpback to top |