FC876168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 9.004e-32 Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 +KG W+ EED+ L +I + G W ++P AGL R GKSCRLRWINYLR LKR I+AEEEE I+ H+SLGN+WS IA +PGRTDNEIKNYW+SHL +K Sbjct: 11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK 113
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31 Identity = 59/117 (50.43%), Postives = 80/117 (68.38%), Query Frame = 3 Query: 186 EKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFWRPSS 536 ++ G +KG WT +ED +L ++ G+ W + K +GL R GKSCRLRW+NYL LKRG +T +EE ++++LHA GNRWS IA +PGRTDNEIKNYW +H+ +K RP S Sbjct: 3 QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVS 119
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFWRPSS 536 +KG WT +ED +L ++ G+ W + K +GL R GKSCRLRW+NYL LKRG +T +EE ++++LHA GNRWS IA +PGRTDNEIKNYW +H+ +K RP S Sbjct: 9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMS 120
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 ++KG WT +ED L ++ GE W + K +GL R GKSCRLRW+NYL LKRG ++ EE +I++LHA GNRWS IA +PGRTDNEIKNYW +H+ +K Sbjct: 8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 ++KG WT +ED L ++ G+ W + K +GL R GKSCRLRW+NYL LK G ++ +EE +II+LHA GNRWS IA +PGRTDNEIKNYW +H+ +K Sbjct: 8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.392e-24 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 204 KGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSR 506 K +W EED IL Y+ G+ +W +PK GL SCR RW+N+L+ LK+G T EEE+ +++LHA LGN+WS +A PGRTDNEIKN+WN+ R Sbjct: 18 KSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNARRMR 118
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21 Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 L KG WT EED + +++Q G W + K+ R GK CR RW N+L ++K+ + T EE+ II + H LGNRW+ IA +PGRTDN +KN+WNS + RK+ Sbjct: 19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKV 122
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 61/162 (37.65%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFWRPSSEKTLPVKVDVAAAGTGVASDR-------KAGKKIGSAIMKNKSHSKKDG 662 L KG WT +EDD++ K ++ G W + + R GK CR RW N+L ++K+ T +E+EII + H LGN+W+ IA +PGRTDN IKN+WNS + RK R V A+G+ + S R K+G S M N H+K+ G Sbjct: 134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG-RIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERR-----------SVNASGSDLKSSRTHLITLIKSGGI--SKCMNNMQHNKESG 281
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB_CHICK (Myb proto-oncogene protein OS=Gallus gallus GN=MYB PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHT--FWRPSSEKTLP 551 L KG WT EED + + +Q G W + K+ R GK CR RW N+L ++K+ + T EE+ II + H LGNRW+ IA +PGRTDN IKN+WNS + RK+ + + SS+ LP Sbjct: 90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKAGLP 208
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHT 518 L KG WT EED+ + + ++ G W + K R GK CR RW N+L ++K+ + T EE+ II + H LGNRW+ IA +PGRTDN +KN+WNS + RK+ T Sbjct: 81 LVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRG-RMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKVET 186 The following BLAST results are available for this feature:
BLAST of FC876168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876168 ID=FC876168; Name=FC876168; organism=Citrus clementina; type=EST; length=720bpback to top |