FC876168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 L KG WT EED + + +Q G W + K+ R GK CR RW N+L ++K+ + T E+ +I + H LGNRW+ IA +PGRTDN IKN+WNS + RK+ Sbjct: 85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKV 188
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 54/133 (40.60%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 204 KGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTF---WRPSSEKTLPVKVDVAAAGTGVAS 593 KG W+ EED+ L + + G +W + K+ R GKSCRLRW N L ++ +AEE+E I + HA GN+W+ IA + GRTDN +KN+WNS L RK + SE PVK V+A V + Sbjct: 6 KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHRPVKRSVSAGSPPVVT 137
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 L KG WT EED + + + G W + K+ R GK CR RW N+L ++K+ + T EE+ I + H LGNRW+ IA +PGRTDN IKN+WNS + RK Sbjct: 87 LIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 189 HSP 2 Score: 71.2478 bits (173), Expect = 6.068e-12 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLL--RCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLG-NRWSLIASNMPGRTDNEIKNYWNSHLSRKI-HTFWRPSSEKTL 548 L K RWT EED+ L K ++ NG W+ + A L R C+ RW L +L +G T EE++ +I+L G RWS+IA ++ GR + + W++HL+ ++ + W ++T+ Sbjct: 35 LGKTRWTREEDEKLKKLVEQNGTEEWKVI---ASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRTI 152
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 195 GLKKGRWTAEEDDILTKYIQANGEGSWRSLP-KNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 G+ KG W EED L + + G W S+ K G R GK CR RW N+L ++++ N T EE++III HASLGN+W+ I+ + GR N IKN+WNS L +KI Sbjct: 274 GIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPG--RIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKI 378
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 3 Query: 156 LRGMGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 L+ GR+ KG WT EED+ L + +G W+ + LR G+ CR RW N L +KR T EE+ II+ H+ GN+W+ I+ +PGRT+ IKN+WNS + RK+ Sbjct: 741 LKKSGRSKSSSNESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLL-CLRNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKL 858
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSR 506 L KG WT +EDD + + ++ G W + + R GK CR RW N+L ++K+ + EE++II HA GN+W+ IA +PGRTDN IKN+WNS + R Sbjct: 199 LVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKG-RMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR 300
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFW 524 L KG W+ EED+ + ++ G W ++ ++ R GK CR RW N+L + + T EEE +I+ H GN+W+ + +PGR+DN IKN+WNS + +K+ +++ Sbjct: 85 LVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPG-RIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYY 192
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPK--NAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++ RW EED +L Y++ G W + + N L R KSC RW NYLR +K+G++T EE+ ++I+L A GN+W IA+ +PGRT + +W Sbjct: 3 ERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWW 100
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16 Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPK--NAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFWRPSSEKTLPVKVD 563 ++ RW EED IL Y++ G W + + N L R KSC RW NYLR +K+G++T +E+ ++I+L A GN+W IA+ +PGRT + +W K R + LP +D Sbjct: 8 ERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEV-FKEKQQRELRDRDRRRLPPPLD 129
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15 Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPK--NAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++ RW+ EED +L Y++ G W + + N L R KSC RW NYL+ +K+G++T EE+ ++I+L GN+W IA+ +PGRT + +W Sbjct: 3 ERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWW 100 The following BLAST results are available for this feature:
BLAST of FC876168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876168 ID=FC876168; Name=FC876168; organism=Citrus clementina; type=EST; length=720bpback to top |