FC876172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Scenedesmus vacuolatus GN=GapC PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22 Identity = 55/118 (46.61%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 379 NGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 NGFGRIG L NDPFI+ +YMAYMFKYDS HG ++G + D + ING+ IK + DP +IPWG+ G DYVVES+GVF GGAK IS+ S Sbjct: 1 NGFGRIGSLVLRATLDRKDVKVVAINDPFIEGEYMAYMFKYDSVHGRYEGDVQG-DKHGITINGEQIKTLAMMDPTQIPWGEVGADYVVESTGVFTTVDKCQAHLKGGAKKVVISAPS 117
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22 Identity = 59/123 (47.97%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 KVGINGFGRIGRL NDPFI YM YMFKYDS HG K I + D+ TL + VF R+P EIPWG G D+VVES+GVF GGAK IS+ S Sbjct: 5 KVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQCKSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 127
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22 Identity = 57/120 (47.50%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 373 GINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 GINGF NDPFID +YM YMFKYDSTHG FKGT+ D L +NG I V ++RDPA+IPWG +G DYV+ES+GVF GGAK IS+ S Sbjct: 7 GINGFRSHWPYCLACSLENPKVKVVAINDPFIDLEYMVYMFKYDSTHGRFKGTVEH-KDGKLVVNGHEIAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPS 125
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22 Identity = 56/122 (45.90%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 KV INGFGRIGRL NDPFI Y AYMFKYDSTHG +KG + + L I+G I VF ++DPA +PWG GVD V++S+GVF GAK I++ S Sbjct: 3 KVAINGFGRIGRLVLRIALQRKALEVVAVNDPFISVDYAAYMFKYDSTHGRYKGEVTT-SGNDLVIDGHKIAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPS 123
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.920e-22 Identity = 57/123 (46.34%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT-INVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 K+GINGFGRIGRL NDPFI YM YMFKYDS HG +K + V D +TL K + VF+ R+P EIPW G D +VES+GVF GGAK IS+ S Sbjct: 6 KIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSNTLLFGQKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPS 128
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.920e-22 Identity = 60/125 (48.00%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTL-EINGK---LIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 VGINGFGRIGRL NDPFI YM Y+FKYDSTHG FKGT+ D + + +GK IKVF+ +DPA I WG D+VVES+GVF GGAK IS+ S Sbjct: 6 VGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPS 130
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.920e-22 Identity = 60/125 (48.00%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTL-EINGK---LIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 VGINGFGRIGRL NDPFI YM Y+FKYDSTHG FKGT+ D + + +GK IKVF+ +DPA I WG D+VVES+GVF GGAK IS+ S Sbjct: 6 VGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPS 130
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21 Identity = 57/128 (44.53%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 352 SDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 S G K+GINGFGRIGRL NDPFI + + +FKYDS HG +K + V D+ TL K + VF R+P EIPWG+ G +YVVES+GVF GGAK IS+ S Sbjct: 3 STGKIKIGINGFGRIGRLVARVALQRDDIELVAVNDPFISTESLTSLFKYDSVHGQWKKHEVKVKDEKTLLFGEKHVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4) HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21 Identity = 55/113 (48.67%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 394 IGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 IGRL NDPFID YM YMF+YDSTHG F GT+ ++ L INGK I +F +RDPA I WGD G +YVVES+GVF GGAK IS+ S Sbjct: 1 IGRLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKKVIISAPS 112
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21 Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 V +NGFGRIGRL NDPFI Y AYMFKYDSTHG F G ++ D + +NGK + VF+++DPA +PWG GVD ++S+G+F GAK I++ S Sbjct: 4 VSVNGFGRIGRLVTRIAISRKDINLVAINDPFISTDYAAYMFKYDSTHGRFDGEVSHDKDHII-LNGKKVAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIEAGAKKVVITAPS 123 The following BLAST results are available for this feature:
BLAST of FC876172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876172 ID=FC876172; Name=FC876172; organism=Citrus clementina; type=EST; length=740bpback to top |