FC876172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 8.349e-20 Identity = 53/114 (46.49%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 +VGINGFGRIGR+ ND +DA YMAYM KYDSTHG F+G + V L +NGK I+V S+RDPA + W + VD VVES+G+F GAK Sbjct: 4 RVGINGFGRIGRVVFRAAQRRNDIEIVGIND-LLDADYMAYMLKYDSTHGRFEGAVEV-QGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.424e-19 Identity = 50/93 (53.76%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 454 NDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 NDPFID YM YMFKYDS HG F G++ D L IN K I VF KRDP +IPWG G +Y+VES+GVF GGAK IS+ S Sbjct: 11 NDPFIDLAYMVYMFKYDSVHGRFSGSVET-KDGKLWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPS 102
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 50/122 (40.98%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 K+GINGFGRIGR+ + ++ Y+AYM KYDS HG F G ++V D +TL +NGK I++ + +DPAE+ WG+ G D VVES+G+F GAK +S+ S Sbjct: 4 KIGINGFGRIGRMVFRAAIANFKDIEVVAINDLLEPDYLAYMLKYDSVHGRFDGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPS 124
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 53/122 (43.44%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 ++GINGFGRIGR+ NDPF D +YM YM KYD+ HG F GTI +DS + +NG I VF P EIPWG VD V+E +G F GG K IS+ S Sbjct: 4 RLGINGFGRIGRMALRASLNIDGVQVVAINDPFTDCEYMEYMLKYDTVHGRFDGTIAHSEDS-ITVNGNKISVFKSMKPEEIPWGKTQVDIVLECTGRFTTKKDAELHITGGCKRVIISAPS 124
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_KLEPN (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Klebsiella pneumoniae GN=gap PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19 Identity = 51/111 (45.95%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 376 INGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 INGFGRIGR+ ND +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F GAK Sbjct: 1 INGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDGTVEV-KDGHLVVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAK 109
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19 Identity = 50/122 (40.98%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 +V INGFGRIGRL NDPFI Y AYMFKYDSTHG + G ++ DD + ++G I F +RDPA +PW +D ++S+GVF GAK I++ S Sbjct: 3 RVAINGFGRIGRLVMRIALQRKNVEVVALNDPFISNDYSAYMFKYDSTHGRYAGEVSH-DDKHIIVDGHKIATFQERDPANLPWASLNIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPS 123
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.143e-19 Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 K+GINGFGRIGR+ ND I+ +Y+AYM KYDS HG F G I V+ + TL +NGK I++ +++DP + WGD +D V+ES+G+F GAK I+S Sbjct: 4 KIGINGFGRIGRVLFRLAQLRSNIEILAIND-LINVQYIAYMLKYDSIHGNFNGKI-VIKNETLFVNGKKIRITNEKDPKNLMWGDLNIDVVIESTGIFLTTEDSYKHIQAGAKKVIITS 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.068e-19 Identity = 53/121 (43.80%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG++ + L ++ I V+ ++P +IPW D G YVVES+GV+ GA+ IS+ S Sbjct: 79 VGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGSVE-FRNGQLVVDNHEISVYQCKEPKQIPWRDVGSPYVVESTGVYLSIEAASNHISAGAQRVVISAPS 197
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.231e-19 Identity = 53/127 (41.73%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 328 PPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 PP + VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KGT+ + L ++ I VF ++P EIPW G YVVE++GV+ GA+ Sbjct: 88 PPPPPPPKPAKELTVGINGFGRIGRLVLRVCMEKGVRVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGTVE-HKNGRLVVDNLEINVFQCKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGAR 212
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18 Identity = 52/116 (44.83%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 388 GRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 GRIGRL NDPFI YM YMFKYDS HG +K + V D+ TL K ++VF R+P EIPW + G D+VVES+GVF GGAK IS+ S Sbjct: 1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 116 The following BLAST results are available for this feature:
BLAST of FC876172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876172 ID=FC876172; Name=FC876172; organism=Citrus clementina; type=EST; length=740bpback to top |