FC876172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16 Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KVGINGFGRIGR ND DA +A++ +YDS HG ++V D + L +NGK I+V ++RDPA++ WG GV+ VVES+G F GAK IS+ Sbjct: 4 KVGINGFGRIGRNVFRAALNNPEVEVVAVND-LTDANMLAHLLQYDSVHGKLDAEVSV-DGNNLVVNGKTIEVSAERDPAKLSWGKQGVEIVVESTGFFTKRADAAKHLEAGAKKVIISA 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16 Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXX--NDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 +V INGFGRIGRL ND D K +A++ KYDS H F G + ++S + ++GK IKVF++ DP+++PW D GVD+V+ES+GVF GAK Sbjct: 3 RVAINGFGRIGRLVYRIIYERKNPDIEVVAIND-LTDTKTLAHLLKYDSVHKKFPGKVEYTENSLI-VDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAK 116
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15 Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 +V INGFGRIGRL ND +A++ KYDS HG FK + V D+TL I+ K + VFS++DPA +PW ++ +D VVES+G F GAK IS+ Sbjct: 9 RVAINGFGRIGRLVFRALLSQKNIEIVAVND-LTHPDTLAHLLKYDSAHGEFKKKV-VAKDNTLMIDKKKVLVFSEKDPANLPWAEHNIDIVVESTGRFVSEEGASLHLQAGAKRVIISA 126
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15 Identity = 45/94 (47.87%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 454 NDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 NDPFI YM YMFKYD+ HG +K + V D TL K + VF R+P EIPW G +YVVES+GVF GGAK IS+ S Sbjct: 2 NDPFITTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHIKGGAKKVIISAPS 95
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15 Identity = 46/116 (39.66%), Postives = 59/116 (50.86%), Query Frame = 1 Query: 367 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KV INGFGRIGR L ND K ++ KYDS G FK + ++D+ T I+GK IKV S RDP ++PW + G+D V+E +GVF GAK Sbjct: 86 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAK 200
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15 Identity = 43/125 (34.40%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 340 QKSRSDGNTKVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 +++ ++ KV INGFGRIGR L + K +++ KYDST G+F + V D+ + ++GK+IKV S R+P+ +PWG+ G+D V+E +GVF GAK Sbjct: 60 RRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAK 184
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 466 IDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V +++DPA + W + GVD V E++G+F GAK Sbjct: 21 LDAEYMAYMLKYDSTHGRFNGTVEV-KDGHLVVNGKTIRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAK 100
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15 Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 283 AAKSIQPIRATATEIPPTIQKSRSDGNTKVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVF 663 A S +RA A + R++ +V INGFGRIGR L ND K +++ KYDST G F + +VDDS + ++GK IK+ S RDP ++PW + +D V+E +GVF Sbjct: 14 AVSSKSGVRAKAAR---AVVDVRAEKKIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSG-GVKQASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVF 138
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_ESCVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia vulneris GN=gap PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15 Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 466 IDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F GAK Sbjct: 21 LDAEYMAYMLKYDSTHGRFDGTVEV-KDGHLVVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAK 100
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_ENTAE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Enterobacter aerogenes GN=gap PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 466 IDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V +++DPA + W + GVD V E++G+F GAK Sbjct: 21 LDAEYMAYMLKYDSTHGRFDGTVEV-KDGHLVVNGKTIRVTAEKDPANLKWNEIGVDVVAEATGIFLTDETARKHITAGAK 100 The following BLAST results are available for this feature:
BLAST of FC876172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876172 ID=FC876172; Name=FC876172; organism=Citrus clementina; type=EST; length=740bpback to top |