FC876172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13 Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD +NGK +K FS+ D +++PW D +D V+E +G + GAK IS+ Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13 Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD +NGK +K FS+ D +++PW D +D V+E +G + GAK IS+ Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13 Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD +NGK +K FS+ D +++PW D +D V+E +G + GAK IS+ Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13 Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KV INGFGRIGRL ND D +A++ KYD+ G F G + V++ +NGK IK F + D ++PWGD +D V+E +G + GAK IS+ Sbjct: 4 KVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVIEGG-FRVNGKEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISA 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13 Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KV INGFGRIGRL ND D +A++ KYD+ G F G + V++ +NGK IK F + D ++PWGD +D V+E +G + GAK IS+ Sbjct: 4 KVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVIEGG-FRVNGKEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISA 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 40/114 (35.09%), Postives = 56/114 (49.12%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 ++GINGFGRIGR + D MA++ YDS G F + + + + + IKV ++RDP +PWGD GVD V+ES+G+F GGAK Sbjct: 4 RIGINGFGRIGRNVFRAAAARSSELEIVAVNDLGDVPTMAHLLAYDSILGRFPEEVTA-EPGAIRVGDRTIKVLAERDPGALPWGDLGVDIVIESTGIFTDAAKARSHVDGGAK 116
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 K+ INGFGRIGR ND D K +A++ KYDST GV+ + D + ++G+ IK+ ++RDP +PW G+D V+ES+GVF KGGY+ ++ Sbjct: 2 KLAINGFGRIGR-NVFKIAFERGIDIVAIND-LTDPKTLAHLLKYDSTFGVYNKKVES-RDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSAT--------SDKGGYLDHVN 112
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.291e-12 Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KV INGFGRIGR+ N + A+ +A++ KYD+ HG + + +DS + +NGK + + + RDP ++PW +Y +D VVE++G F GAK Sbjct: 4 KVAINGFGRIGRMVFRKAMLDDQIQVVAINASY-SAETLAHLIKYDTIHGRYDKEVVAGEDSLI-VNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKFNAKDKAMGHIEAGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P3_ECOLI (Putative glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli (strain K12) GN=gapC PE=5 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12 Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 +KVGINGFGRIGRL + K +AY+ K+DS +G F +++ +DS + ++GK I V+++++ IPW G + +VE +G + GAK IS+ Sbjct: 2 SKVGINGFGRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLI-VDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISA 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12 Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 +KVGINGFGRIGRL + K +AY+ K+DS +G F +++ +DS + ++GK I V+++++ IPW G + +VE +G + GAK IS+ Sbjct: 2 SKVGINGFGRIGRLVLRRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLI-VDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISA 121 The following BLAST results are available for this feature:
BLAST of FC876172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876172 ID=FC876172; Name=FC876172; organism=Citrus clementina; type=EST; length=740bpback to top |