FC876174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_GLOVI (Elongation factor Tu OS=Gloeobacter violaceus GN=tufA PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 64/193 (33.16%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTS 665 + K H+NI IGHVD GK+T T + L + + +++++ +D+ E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + E+V+ EV L K + + VP V S Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITMTLAALGRAKAKKYDE---------------IDQAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPNIVVFLNKKD----QLDDPELLELVELEVRELLSKYDFPGDDVPIVAGS 174
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CLOK5 (Elongation factor Tu OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tuf1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 65/196 (33.16%), Postives = 99/196 (50.51%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK+T T + L K ++++ +DK E+ERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + VP + S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMVLAKEGKASATKYDE---------------IDKAPEEKERGITINTAHVEYETEVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKSD----QVDDPELIELVEMEVRELLSEYGFPGDDVPIIVGSALK 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 66/195 (33.85%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK+T T + L E ++F Y + DK E+ERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D D + EV L + G+ + P V S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITTILA--------------KEGKAKAFNYEEI-DKAPEEKERGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEYIVVFLNKADQVD---DPELIDLVEMEVRELLNEYGFPGDDTPIVVGSALK 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CHLCH (Elongation factor Tu OS=Chlorobium chlorochromatii (strain CaD3) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 69/200 (34.50%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 ++K H+NI IGHVD GK+T T + L ++ +A+ +R F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + S EGD Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITLVLS----------KQGLAQ--ERDFGS---IDKAPEERERGITISTAHVEYQTDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVNVPSLVVFLNKVDIADPEL----IELVELELRELLSQYDFPGDDIPIIKGSALKAMEGD 181
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_BORHD (Elongation factor Tu OS=Borrelia hermsii (strain DAH) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 64/194 (32.99%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGF 671 + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G+ P P V S F Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETAGRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PGDTPIVKGSAF 175
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SODGM (Sulfate adenylyltransferase subunit 1 OS=Sodalis glossinidius (strain morsitans) GN=cysN PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 62/201 (30.85%), Postives = 104/201 (51.74%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNM 686 + K+ + + G VD GKST G L++ I + + + + + K A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S D A+L+ID G + QTR H+ ++ LG++ ++ NKMD + + + I ++ + +++ + + + FVP S EGDN+ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSTLHTDSKRLGTQGDKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDVAILLIDVRKGVLD-------QTRLHSFISTLLGIRHLVVAVNKMDLVA--FDEQIFQGIRQDYLRFAEQLPVDLD-ITFVPLSALEGDNV 213
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 62/196 (31.63%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQ 178
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 62/196 (31.63%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQ 178
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_PEDPA (Elongation factor Tu OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 73/200 (36.50%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGHVD GK+T T + L EK +A+ + YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + VP + S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLS----------EKGLAKASD----YADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAHQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDFPGDDVPVLRGSALKALEGD 182
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 554 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142 The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bpback to top |