FC876174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_BIFLO (Elongation factor Tu OS=Bifidobacterium longum GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 67/194 (34.54%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGF 671 + K H+NI IGHVD GK+T T I K + E F E + +D E RGITI+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D + + + +EV L + G++ + P + TS + Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEFPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCDMVD---DEELIELVEEEVRDLLDENGFDRD-CPVIHTSAY 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_BIFLI (Elongation factor Tu OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 67/194 (34.54%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGF 671 + K H+NI IGHVD GK+T T I K + E F E + +D E RGITI+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D + + + +EV L + G++ + P + TS + Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEFPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCDMVD---DEELIELVEEEVRDLLDENGFDRD-CPVIHTSAY 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_BIFLD (Elongation factor Tu OS=Bifidobacterium longum (strain DJO10A) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 67/194 (34.54%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGF 671 + K H+NI IGHVD GK+T T I K + E F E + +D E RGITI+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D + + + +EV L + G++ + P + TS + Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEFPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCDMVD---DEELIELVEEEVRDLLDENGFDRD-CPVIHTSAY 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_THEMA (Elongation factor Tu OS=Thermotoga maritima GN=tuf PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 67/195 (34.36%), Postives = 94/195 (48.21%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+N+ IGH+D GKST T + K ++ + +DK E+ RGITI+I ++ET K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK D D + EV L + GY ++VP + S + Sbjct: 8 RTKPHVNVGTIGHIDHGKSTLTAAI---------------TKYLSLKGLAQYIPYDQIDKAPEEKARGITINITHVEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVIRGSALK 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_TAXOC (Elongation factor Tu OS=Taxeobacter ocellatus GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 67/197 (34.01%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGD 680 + K H+NI IGHVD GK+T T + L K +A KR F +D E+ERGITI+ A ++ T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV Q++ NK+D + ++E+ S+ G N V G GD Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAN----------KGLAA--KRDFSS---IDNAPEEKERGITINTAHVEYSTANRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPQLVVFMNKVDMVDDPELLELVEMEIRELLSFYDFDGDNIPVVQGSALGGLNGD 182
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_SALRD (Elongation factor Tu OS=Salinibacter ruber (strain DSM 13855) GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 69/196 (35.20%), Postives = 101/196 (51.53%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTSGFE 674 +EK H+N+ IGHVD GK+T T I K + ER V +++F+ +D ERERGITI + ++ET + +D PGH D++KNM+TG +Q D A+L++ S G QTREH LLA +GV ++ NK D A E+V+ EV L + + ++VP V S + Sbjct: 8 REKPHVNVGTIGHVDHGKTTLTA-------AITKVLAER----VGGAAEQTFE---AIDNAPEERERGITIATSHVEYETENRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVGSDDGPMP-------QTREHILLARQVGVPYLVVFMNKTDLV----DDAELLELVEMEVRELLTEYEFPGDEVPVVRGSALQ 178
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_RICSI (Elongation factor Tu OS=Rickettsia sibirica GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ +++P + S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKIDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQ 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_RICRS (Elongation factor Tu OS=Rickettsia rickettsii (strain Sheila Smith) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ +++P + S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKIDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQ 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_RICRO (Elongation factor Tu OS=Rickettsia rickettsii (strain Iowa) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ +++P + S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKIDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQ 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_RICRI (Elongation factor Tu OS=Rickettsia rickettsii GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ +++P + S + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKIDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQ 177 The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bpback to top |