FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9339 contig Ccv1_Contig9339:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_BACTN (Sulfate adenylyltransferase subunit 1 OS=Bacteroides thetaiotaomicron GN=cysN PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIY---KLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            ++K  + ++  G VD GKST  G L++   KL       +ER  K V    +    YA +LD LKAERE+GITID+A   F T      + D PGH  + +NMITG S A+ A++++D+ TG          QTR H  L   LG+K ++   NKMD     +S+ R+DEIV E   +++ +G     V  +P S  +GDN++++S
Sbjct:   15 EQKDLLRLLTAGSVDDGKSTLIGRLLFDSKKLYEDQLDALERDSKRVGNAGEH-IDYALLLDGLKAEREQGITIDVAYRYFSTNGRKFIIADTPGHEQYTRNMITGGSTANLAIILVDARTGVIT-------QTRRHTFLVSLLGIKHVVLAVNKMDLV--DFSEERFDEIVSEYKKFVEPLGI--PDVNCIPLSALDGDNVVDKS 208          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSNC_RHOBA (Bifunctional enzyme cysN/cysC OS=Rhodopirellula baltica GN=cysNC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 72/215 (33.49%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWV---------LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            ++K  +  +  G VD GKST  G L+Y     D +++  +E E+A++   S +   V         +D LK ERE+GITID+A   F T K    + D PGH  + +NM TG S AD A+++ID+  G          QTR H+ +   LG++ ++   NKMD     YS+ R++EI  +  S+  ++  +   + F+P S   GDN+++RS N+
Sbjct:   20 EQKQLLRFITCGSVDDGKSTLIGRLLY-----DSKLV--YEDELAKVQSDSVRQGSVAGGFDPSLFMDGLKEEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASSADLAIILIDARHGVLT-------QTRRHSFIVSLLGIRHVVVAVNKMDIDGVDYSEDRFNEICDDYRSFATRL--DLPDLHFIPISALNGDNLVDRSENM 218          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: NODQ_RHIME (Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=nodQ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.731e-28
Identity = 74/212 (34.91%), Postives = 118/212 (55.66%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEM---------NKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTN 704
            K+ +  +  G VD GKST  G L+Y     D +++  FE ++A +         N +    A +LD L+AERE+GITID+A   F T+K    V D PGH ++ +NM+TG S AD A+++IDS  G  +       QTR H+ +A  LG++ ++   NK+D     + +  Y+EIV +  ++ K++G+    +  +P S  +GDN+I  S N
Sbjct:   22 KSILRFITCGSVDDGKSTLIGRLLY-----DAKLV--FEDQLANLGRVGSPGAANGKEIDLALLLDGLEAEREQGITIDVAYRYFATSKRKFIVADTPGHEEYTRNMVTGASTADLAIILIDSRQGILQ-------QTRRHSYIASLLGIRHVVLAVNKIDLV--DFKQQVYEEIVADYMAFAKELGF--ASIRPIPISARDGDNVISASAN 215          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHEWM (Sulfate adenylyltransferase subunit 1 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=cysN PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27
Identity = 73/208 (35.10%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKR--SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K  + ++  G VD GKST  G L++    I +  +   EK+    N    SF  A ++D L++ERE+GITID+A   F T +    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMDA    Y +A Y +I KE   + + + ++   V FVP S  +GDN++  S N+
Sbjct:   20 ENKDMLRVLTCGSVDDGKSTLIGRLLFDSKMIFEDQMAAIEKDSKRFNTTDDSFDLALLVDGLQSEREQGITIDVAYRYFTTEQRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARHG-------VQVQTRRHSFICSQLGIKHVIIAINKMDAI--DYDQATYQKIKKEYREFAEDLSFS--DVRFVPISALKGDNVVNESPNM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_COLP3 (Sulfate adenylyltransferase subunit 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=cysN PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27
Identity = 76/215 (35.35%), Postives = 114/215 (53.02%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK---------YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K  +  +  G VD GKST  G L++     D ++I  FE ++A + K S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K ++   NKMD     YS+ RY EI KE   + + + ++   V FVP S   GDN+++ S N+
Sbjct:   20 ENKELVRFLTCGSVDDGKSTLIGRLLH-----DSKMI--FEDQLAAIEKDSKKSGTTGEAIDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASTCDIAIILIDARYG-------VQTQTRRHSFICSLLGIKHIVVAVNKMDLV--DYSQERYQEIKKEYREFTESLEFS--DVRFVPLSALNGDNVVDESVNM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_CHRSD (Sulfate adenylyltransferase subunit 1 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=cysN PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27
Identity = 76/212 (35.85%), Postives = 115/212 (54.25%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRS---------FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            ++K  +  +  G VD GKST  G L++     D ++I  +E ++A + + S            A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S A  AV++ID+  G          QTR H+ +A  LG++ ++   NKMD     YS+AR+DEIV E   +  K+  N   + FVP S  EGDN++ +S
Sbjct:   20 EQKDLLRFITCGSVDDGKSTLIGRLLH-----DSKMI--YEDQLAAITQASRTSGTTGDQVDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASTASLAVILIDARHG-------VQTQTRRHSFIADLLGIQHLVIAVNKMDLV--DYSQARFDEIVAEYREFAAKL--NAPDIHFVPLSALEGDNVVNKS 213          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_BACFR (Sulfate adenylyltransferase subunit 1 OS=Bacteroides fragilis GN=cysN PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27
Identity = 69/205 (33.66%), Postives = 111/205 (54.15%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            ++K  + ++  G VD GKST  G L++    + +  ++  E++   +        YA +LD LKAERE+GITID+A   F T      + D PGH  + +NMITG S A+ A++++D+  G          QTR H  L   LG+K ++   NKMD     +S+ R++EIV E   ++  +G     V  +P S  +GDN++++S
Sbjct:   15 EQKDLLRLLTAGSVDDGKSTLIGRLLFDSKKLYEDQLDALERDSKRLGNAGEHIDYALLLDGLKAEREQGITIDVAYRYFSTNNRKFIIADTPGHEQYTRNMITGGSTANLAIILVDARMGVIT-------QTRRHTFLVSLLGIKHVVLAVNKMDLV--DFSEERFNEIVAEYKKFVAPLGI--PDVTCIPLSALDGDNVVDKS 208          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_BACFN (Sulfate adenylyltransferase subunit 1 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=cysN PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27
Identity = 69/205 (33.66%), Postives = 111/205 (54.15%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            ++K  + ++  G VD GKST  G L++    + +  ++  E++   +        YA +LD LKAERE+GITID+A   F T      + D PGH  + +NMITG S A+ A++++D+  G          QTR H  L   LG+K ++   NKMD     +S+ R++EIV E   ++  +G     V  +P S  +GDN++++S
Sbjct:   15 EQKDLLRLLTAGSVDDGKSTLIGRLLFDSKKLYEDQLDALERDSKRLGNAGEHIDYALLLDGLKAEREQGITIDVAYRYFSTNNRKFIIADTPGHEQYTRNMITGGSTANLAIILVDARMGVIT-------QTRRHTFLVSLLGIKHVVLAVNKMDLV--DFSEERFNEIVAEYKKFVAPLGI--PDVTCIPLSALDGDNVVDKS 208          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_AERS4 (Sulfate adenylyltransferase subunit 1 OS=Aeromonas salmonicida (strain A449) GN=cysN PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++    I +  ++  E +  ++     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G  +       QTR H+ +A  LG+KQ +   NKMD    ++S+  +D I  +   + KK+  N + +  VP S  +GDN++  S  L
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLHDSQQIYEDQLKALESDSQKLGTTGEKLDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIISDTPGHEQYTRNMATGASTCDLAIILIDARKGVLD-------QTRRHSFIASLLGIKQFVVAVNKMDLV--EFSQEVFDRISADYREFAKKL--NVDTIQIVPVSALDGDNVVNPSDKL 218          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_AGRT5 (Sulfate adenylyltransferase subunit 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=cysN PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26
Identity = 67/203 (33.00%), Postives = 109/203 (53.69%), Query Frame = 3
Query:   84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMI 689
            + ++   + ++  G VD GKST  G L++    + +       ++  + N      +A +LD L+AERE+GITID+A   F T +    V D PGH  + +NM TG S AD AVL++D+ TG  E       QTR HA +A  +G++Q +   NK+D T   Y KA ++ I  E   +   +G   +++  +P S  +G+N++
Sbjct:   24 VARDTRPLRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLHRDSGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFATDRRAFIVADTPGHEQYTRNMATGASTADLAVLLVDARTGILE-------QTRRHATIAALMGIRQFVLAVNKIDLT--NYDKAGFELIAHEFRDFASDLGI--KQITAIPMSALKGENVV 215          
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_BACTN4.099e-2936.89Sulfate adenylyltransferase subunit 1 OS=Bacteroid... [more]
CYSNC_RHOBA5.919e-2833.49Bifunctional enzyme cysN/cysC OS=Rhodopirellula ba... [more]
NODQ_RHIME7.731e-2834.91Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=... [more]
CYSN_SHEWM1.010e-2735.10Sulfate adenylyltransferase subunit 1 OS=Shewanell... [more]
CYSN_COLP31.319e-2735.35Sulfate adenylyltransferase subunit 1 OS=Colwellia... [more]
CYSN_CHRSD1.319e-2735.85Sulfate adenylyltransferase subunit 1 OS=Chromohal... [more]
CYSN_BACFR1.722e-2733.66Sulfate adenylyltransferase subunit 1 OS=Bacteroid... [more]
CYSN_BACFN1.722e-2733.66Sulfate adenylyltransferase subunit 1 OS=Bacteroid... [more]
CYSN_AERS41.116e-2633.65Sulfate adenylyltransferase subunit 1 OS=Aeromonas... [more]
CYSN_AGRT51.458e-2633.00Sulfate adenylyltransferase subunit 1 OS=Agrobacte... [more]

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Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
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