FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: NODQ_RHISB (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain BR816) GN=nodQ PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26
Identity = 72/212 (33.96%), Postives = 117/212 (55.19%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEM---------NKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTN 704
            K+ +  +  G VD GKST  G L+     +D +++  FE ++  +         N      A +LD L+AERE+GITID+A   F T+K    V D PGH ++ +NM+TG S AD AV++IDS  G  +       QTR H+ +A  LG++ ++   NK+D    ++ ++ +DEI ++  ++ KK+G+    +  +P +   GDN+I  S N
Sbjct:   22 KSVLRFITCGSVDDGKSTLIGRLL-----VDAKLV--FEDQLTNLGRVGSSGAVNGGEIDLALLLDGLEAEREQGITIDVAYRYFATSKRKFIVADTPGHEEYTRNMVTGASTADLAVILIDSRQGILQ-------QTRRHSYIASLLGIRHVVLAVNKIDLV--EFRQSVFDEIARDYKAFAKKLGF--ASIQPIPIAARFGDNVISASPN 215          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ALISL (Sulfate adenylyltransferase subunit 1 OS=Aliivibrio salmonicida (strain LFI1238) GN=cysN PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26
Identity = 70/208 (33.65%), Postives = 109/208 (52.40%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++    I    +E    +   +     +   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ +A  LG++  +   NKMD     YS++R++EI +E  ++ KK+      +  +P S  EGDN++  S  L
Sbjct:   22 QHKSMLRFLTCGSVDDGKSTLIGRLLHDSKQIYADQLEAVHADSQRVGTTGERPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIISDTPGHEQYTRNMATGASTCDVAVILIDARKGVLD-------QTRRHSYIANLLGIRHFVVAVNKMDLV--DYSQSRFEEIKEEYVTFSKKLNNPNLDISILPLSALEGDNVVNHSAAL 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_PSYIN (Sulfate adenylyltransferase subunit 1 OS=Psychromonas ingrahamii (strain 37) GN=cysN PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26
Identity = 69/208 (33.17%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNK--RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K  +  +  G VD GKST  G L++    I +  +   EK+  + N     F  + ++D L++ERE+GITID+A   F T +    + D PGH  + +NM+TG S  D A+++ID+  G          QTR H+ +   LG+K ++   NKMDA    Y +A Y +I  +   + K++  N   + FVP S  +GDN++  S N+
Sbjct:   20 ENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIEKDSKKFNTTDNDFDLSLLVDGLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYG-------VQVQTRRHSYICSLLGIKHLVVAVNKMDAV--DYDQAVYKKIKADYREFAKQL--NIADIRFVPISALKGDNVVNESENM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFT (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=cysNC PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26
Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            K  +  +  G VD GKST  GHL+Y     D + +   E ++A++   S +Y         A +LD L AERE+GITID+A   F+T K    V D PGH  + +NM TG S AD AV+++D+  G          QTR H+ +   LG++ ++   NKMD     Y +  ++ I  +  +   K+G N  +V  +P S  EGDN+ +RS  +
Sbjct:   14 KPLLRFITCGSVDDGKSTLIGHLLY-----DSQCLA--EDQLADLTVDSQRYGTQGEHIDYALLLDGLAAEREQGITIDVAYRYFDTEKRKFIVADCPGHAQYTRNMATGASSADAAVVLVDARKGLLT-------QTRRHSYIVALLGIRHVVLAVNKMDLV--GYDQQTFEAIASDYLALAAKLGIN--QVQCIPLSALEGDNLCKRSARM 208          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SACD2 (Sulfate adenylyltransferase subunit 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cysN PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26
Identity = 71/211 (33.65%), Postives = 110/211 (52.13%), Query Frame = 3
Query:   81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            A  ++K  +  +  G VD GKST  G L++    I +  +E    + ++      K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     YS+  ++ I +      K +G   E + FVP S  +GDN++ +S N+
Sbjct:   17 AQHEQKELLRFLTCGSVDDGKSTLIGRLLHDSKMIYEDQLEAVRNDNSKHGTTGDKVDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDMAIILIDARHGVMT-------QTRRHSFIASLLGIKHLVIAINKMDLV--DYSQETFESIKQAYGEVAKTLG--QENLYFVPMSALDGDNVVNKSENM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_RHIME (Sulfate adenylyltransferase subunit 1 OS=Rhizobium meliloti GN=cysN PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26
Identity = 69/197 (35.03%), Postives = 107/197 (54.31%), Query Frame = 3
Query:  105 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVA-EMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMI 689
            + ++  G VD GKST  G L++    + +      +++ + + N      +A +LD L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD AVL++D+  G  E       QTR HA +A  +G++Q +   NK+D T   Y +AR+D+I  E       +G    +V  +P S  +G+N++
Sbjct:   33 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAASLQRDSSGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFATDKRSFIVADTPGHEQYTRNMATGASTADLAVLLVDARVGLLE-------QTRRHATIATLMGIRQFVLAVNKIDLT--NYDRARFDQISHEFRELALSLGV--RQVTAIPVSALKGENVV 218          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_TERTT (Sulfate adenylyltransferase subunit 1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=cysN PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 74/215 (34.42%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            A  + K  +  +  G VD GKST  G L++     D ++I  +E ++A +   + K+         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G          QTR H+ +A  LG+K ++   NKMD    ++S++R++EI +      K +  NP ++ FVP S  +GDN++  S
Sbjct:   17 AQHERKELLRFLTCGSVDDGKSTLIGRLLH-----DSKMI--YEDQLAAVASDTTKHGTTGEKIDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARYG-------VQTQTRRHSYIASLLGIKHVVVAINKMDLV--EFSESRFEEIKQSYLDLSKSL--NPAELHFVPMSALDGDNVVNIS 213          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_AERHH (Sulfate adenylyltransferase subunit 1 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=cysN PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 69/208 (33.17%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++    I +  ++  E +  ++     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G  +       QTR H+ +A  LG+KQ +   NKMD    ++S+  ++ I  E   + KK+  + + +  VP S  +GDN++  S  L
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLHDSQQIYEDQLKALESDSQKLGTTGEKLDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIISDTPGHEQYTRNMATGASTCDLAIILIDARKGVLD-------QTRRHSFIASLLGIKQFVVAVNKMDLV--EFSQEVFERISAEYREFAKKL--SVDTIHIVPVSALDGDNVVNPSDKL 218          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFA (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa GN=cysNC PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 71/206 (34.47%), Postives = 105/206 (50.97%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGI--DKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            K  +  +  G VD GKST  GHL+Y    +  D+      + +          YA +LD L AERE+GITID+A   F+T K    V D PGH  + +NM TG S AD AV+++D+  G          QTR H+ +   LG++ ++   NKMD     Y +  ++ I  +  +   K+G N  +V  +P S  EGDN+ +RS  +
Sbjct:   14 KPLLRFITCGSVDDGKSTLIGHLLYDSQCLAEDQLADLMVDSQRYGTQGEHIDYALLLDGLAAEREQGITIDVAYRYFDTEKRKFIVADCPGHAQYTRNMATGASTADAAVVLVDARKGLLT-------QTRRHSYIVALLGIRHVVLAVNKMDLV--GYDQETFEAIASDYLALAAKLGIN--QVQCIPLSALEGDNLSKRSARM 208          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: NODQ_RHITR (Bifunctional enzyme nodQ OS=Rhizobium tropici GN=nodQ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25
Identity = 74/209 (35.41%), Postives = 113/209 (54.07%), Query Frame = 3
Query:  105 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEM--------NKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            +  +  G VD GKST  G L+      D +++  FE ++A++        N     ++ VLD L+AERE+GITID+A   F T+K    V D PGH ++ +NM TG S AD AV+++DS  G  +       QTR H+ LA  LG++ ++   NK+D     +S+  +D IV E   +  K+G+    V  +P S   GDN++ +S  L
Sbjct:   25 LRFITCGSVDDGKSTLIGRLL-----CDAQLV--FEDQLADLRHGGIRGGNGEEIDFSLVLDGLEAEREQGITIDVAYRYFSTSKRKFIVADTPGHFEYTRNMATGASTADLAVILVDSRQGILQ-------QTRRHSYLASLLGIRHVVLAVNKIDLI--DFSEPIFDAIVAEYVRFSAKLGF--ASVMAIPMSARFGDNVVSKSGKL 215          
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NODQ_RHISB1.904e-2633.96Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
CYSN_ALISL3.248e-2633.65Sulfate adenylyltransferase subunit 1 OS=Aliivibri... [more]
CYSN_PSYIN4.242e-2633.17Sulfate adenylyltransferase subunit 1 OS=Psychromo... [more]
CYSNC_XYLFT4.242e-2634.74Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
CYSN_SACD25.540e-2633.65Sulfate adenylyltransferase subunit 1 OS=Saccharop... [more]
CYSN_RHIME5.540e-2635.03Sulfate adenylyltransferase subunit 1 OS=Rhizobium... [more]
CYSN_TERTT7.236e-2634.42Sulfate adenylyltransferase subunit 1 OS=Teredinib... [more]
CYSN_AERHH7.236e-2633.17Sulfate adenylyltransferase subunit 1 OS=Aeromonas... [more]
CYSNC_XYLFA1.234e-2534.47Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
NODQ_RHITR2.105e-2535.41Bifunctional enzyme nodQ OS=Rhizobium tropici GN=n... [more]

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Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
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