FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9339 contig Ccv1_Contig9339:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_RHITR (Sulfate adenylyltransferase subunit 1 OS=Rhizobium tropici GN=cysN PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 67/197 (34.01%), Postives = 107/197 (54.31%), Query Frame = 3
Query:  105 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKE-VAEMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMI 689
            + ++  G VD GKST  G L++    + +      +++   + N      +A +LD L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD AVL++D+  G  E       QTR HA +A  LG+KQ +   NK+D T   Y +A +++I  +   +   +G   +++  +P S  +G+N++
Sbjct:   27 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLQRDSTGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFSTDKRSFIVADTPGHEQYTRNMATGASTADLAVLLVDARMGILE-------QTRRHATIASLLGIKQFVLAINKIDLT--NYDRAGFEKISHDFREFALSLGV--KQITAIPMSALKGENVV 212          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBFM (Sulfate adenylyltransferase subunit 1 OS=Vibrio fischeri (strain MJ11) GN=cysN PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 69/206 (33.50%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            K+ +  +  G VD GKST  G L++    I    ++    +   +     +   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + AV++ID+  G  +       QTR H+ +A  LG++  I   NKMD    +YS++R++EI +E  ++ KK+      +  +P S  EGDN++  S  L
Sbjct:   24 KSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYADQLDAVHADSQRVGTTGERPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCNVAVILIDARKGVLD-------QTRRHSYIANLLGIRHFIVAVNKMDLV--EYSQSRFEEIKEEYLAFSKKLNNPNLDISILPLSALEGDNVVNPSEAL 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_PSEA6 (Sulfate adenylyltransferase subunit 1 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=cysN PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 72/214 (33.64%), Postives = 117/214 (54.67%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK---------YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTN 704
            ++K  +  +  G VD GKST  G L++     D ++I  +E ++A + K S K          A ++D L +ERE+GITID+A   F T K    + D PGH  + +NM+TG S  D A++++D+      AG+    QTR H+ L   LG+K +I   NKMD    ++S+  Y+ I K+   + +++  +   + FVP S  +GDN++ +S N
Sbjct:   20 EQKDMLRFLTCGSVDDGKSTLIGRLLH-----DSKMI--YEDQLAAITKDSKKSGTTGDKVDLALLVDGLASEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMVTGASTCDLAIILVDA-----RAGVKT--QTRRHSFLVSLLGIKHVIVAINKMDLM--EFSEEVYENIKKDYLVFSEQL--DIPDIQFVPISALDGDNVVNKSEN 215          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_FRATN (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. novicida (strain U112) GN=cysN PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 77/216 (35.65%), Postives = 112/216 (51.85%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPTSGFEGDNMIERSTNL 707
            ++K  +  +  G VD GKST  G L++     D ++I  FE ++A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVP S  +GDN++ +ST +
Sbjct:   20 QQKELLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHSFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSTKM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSNC_PSEAE (Bifunctional enzyme cysN/cysC OS=Pseudomonas aeruginosa GN=cysNC PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 64/205 (31.22%), Postives = 109/205 (53.17%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K  +  +  G+VD GKST  G L++    I +  +E   ++  ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG++ ++   NKMD     + +  +++I  +  ++ +K+G     + FVP S  +GDN++ +S
Sbjct:   20 ERKELLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKVGTTGDDVDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARYG-------VQTQTRRHSFIASLLGIRHIVVAINKMD--LKDFDQGVFEQIKADYLAFAEKIGLKTSSLHFVPMSALKGDNVVNKS 215          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBHB (Sulfate adenylyltransferase subunit 1 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=cysN PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25
Identity = 68/206 (33.01%), Postives = 107/206 (51.94%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            K+ +  +  G VD GKST  G L++    I +  +     +   +     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV+++D+  G  +       QTR H+ ++  LG+K  +   NKMD     YS+ R++EI  E   + + +    + +  +P S  EGDN++E+  NL
Sbjct:   24 KSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYEDQLAAVHSDSQRVGTTGEKPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARKGVLD-------QTRRHSFISNLLGLKHFVVAINKMDLV--DYSQERFEEIRDEYLQFSENLAGETD-IQIIPLSALEGDNVVEKGQNL 219          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBF1 (Sulfate adenylyltransferase subunit 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=cysN PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25
Identity = 68/206 (33.01%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            K+ +  +  G VD GKST  G L++    I    ++    +   +     +   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + AV++ID+  G  +       QTR H+ +A  LG++  +   NKMD    +YS++R++EI +E  ++ KK+      +  +P S  EGDN++  S  L
Sbjct:   24 KSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYADQLDAVHADSQRVGTTGERPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCNVAVILIDARKGVLD-------QTRRHSYIANLLGIRHFVVAVNKMDLV--EYSQSRFEEIKEEYLAFSKKLNNPNLDISILPLSALEGDNVVNPSDAL 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_AGRRK (Sulfate adenylyltransferase subunit 1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=cysN PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 66/197 (33.50%), Postives = 106/197 (53.81%), Query Frame = 3
Query:  105 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKE-VAEMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMI 689
            + ++  G VD GKST  G L++    + +      +++   + N      +A +LD L+AERE+GITID+A   F T      V D PGH  + +NM TG S AD A+L+ID+  G  E       QTR HA +A  LG+KQ +   NK+D T   Y +A +++I  +   +   +G   +++  +P S  +G+N++
Sbjct:   27 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLQRDSTGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFSTDNRSFIVADTPGHEQYTRNMATGASTADLAILLIDARLGILE-------QTRRHATIASLLGIKQFVLAVNKIDLT--NYDRAGFEKIAHDFREFALSLGV--KQITAIPMSALKGENVV 212          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBVU (Sulfate adenylyltransferase subunit 1 OS=Vibrio vulnificus GN=cysN PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 71/215 (33.02%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D + I  +E ++A ++  S +          A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ ++  LG+K  +   NKMD    ++S+ R++EI  E  ++ K +    + +  +P S  EGDN++E S  +
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DSKQI--YEDQLAAVHNDSQRVGTTGSRPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLD-------QTRRHSFISNLLGLKHFVVAVNKMDLV--EFSQQRFEEIKAEYQAFSKNLRGETD-IQIIPISALEGDNVVELSQQM 219          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBPA (Sulfate adenylyltransferase subunit 1 OS=Vibrio parahaemolyticus GN=cysN PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 68/206 (33.01%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            K+ +  +  G VD GKST  G L++    I +  +     +   +     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV+++D+  G  +       QTR H+ ++  LG+K  +   NKMD     YS+AR++EI  E   + + +  + + +  +P S  EGDN++++  NL
Sbjct:   24 KSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYEDQLAAVHSDSQRVGTTGEKPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARKGILD-------QTRRHSFISNLLGLKHFVVAINKMDLV--DYSQARFEEIRDEYLKFSENLTGDID-IQIIPISALEGDNVVDKGQNL 219          
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_RHITR2.750e-2534.01Sulfate adenylyltransferase subunit 1 OS=Rhizobium... [more]
CYSN_VIBFM3.591e-2533.50Sulfate adenylyltransferase subunit 1 OS=Vibrio fi... [more]
CYSN_PSEA63.591e-2533.64Sulfate adenylyltransferase subunit 1 OS=Pseudoalt... [more]
CYSN_FRATN3.591e-2535.65Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
CYSNC_PSEAE3.591e-2531.22Bifunctional enzyme cysN/cysC OS=Pseudomonas aerug... [more]
CYSN_VIBHB4.690e-2533.01Sulfate adenylyltransferase subunit 1 OS=Vibrio ha... [more]
CYSN_VIBF14.690e-2533.01Sulfate adenylyltransferase subunit 1 OS=Vibrio fi... [more]
CYSN_AGRRK6.125e-2533.50Sulfate adenylyltransferase subunit 1 OS=Agrobacte... [more]
CYSN_VIBVU8.000e-2533.02Sulfate adenylyltransferase subunit 1 OS=Vibrio vu... [more]
CYSN_VIBPA8.000e-2533.01Sulfate adenylyltransferase subunit 1 OS=Vibrio pa... [more]

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Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
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