FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9339 contig Ccv1_Contig9339:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBCM (Sulfate adenylyltransferase subunit 1 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=cysN PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 73/212 (34.43%), Postives = 113/212 (53.30%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K+ +  +  G VD GKST  G L++     D + I  +E ++A ++  S +          A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ ++  LG+K  I   NKMD     YS+ R+++I  E   + K +    E +  +P S  EGDN++E+S
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DSKQI--YEDQLAAVHNDSQRVGTTGSRPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLD-------QTRRHSFISNLLGLKHFIVAVNKMDLV--DYSQDRFEQIRAEYLEFSKHLQGETE-IQIIPLSALEGDNVVEKS 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBCH (Sulfate adenylyltransferase subunit 1 OS=Vibrio cholerae GN=cysN PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 73/212 (34.43%), Postives = 113/212 (53.30%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K+ +  +  G VD GKST  G L++     D + I  +E ++A ++  S +          A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ ++  LG+K  I   NKMD     YS+ R+++I  E   + K +    E +  +P S  EGDN++E+S
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DSKQI--YEDQLAAVHNDSQRVGTTGSRPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLD-------QTRRHSFISNLLGLKHFIVAVNKMDLV--DYSQDRFEQIRAEYLEFSKHLQGETE-IQIIPLSALEGDNVVEKS 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBC3 (Sulfate adenylyltransferase subunit 1 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=cysN PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 73/212 (34.43%), Postives = 113/212 (53.30%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K+ +  +  G VD GKST  G L++     D + I  +E ++A ++  S +          A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ ++  LG+K  I   NKMD     YS+ R+++I  E   + K +    E +  +P S  EGDN++E+S
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DSKQI--YEDQLAAVHNDSQRVGTTGSRPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLD-------QTRRHSFISNLLGLKHFIVAVNKMDLV--DYSQDRFEQIRAEYLEFSKHLQGETE-IQIIPLSALEGDNVVEKS 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_CELJU (Sulfate adenylyltransferase subunit 1 OS=Cellvibrio japonicus (strain Ueda107) GN=cysN PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24
Identity = 69/208 (33.17%), Postives = 112/208 (53.85%), Query Frame = 3
Query:   81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            A  ++K  +  +  G VD GKST  G L++    I +  +E    + ++      K   A ++D L+AERE+GITID+A   F T+K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     ++++ ++ I  +  ++  K+G   + V FVP S  +GDN++ RS
Sbjct:   17 AQHEKKELLRFLTCGSVDDGKSTLIGRLLHDSKMIYEDQLEAVRADSSKHGTTGEKIDLALLVDGLQAEREQGITIDVAYRYFSTSKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARHGVMT-------QTRRHSYIASLLGIKHIVVAINKMDLL--DFNESVFENIKADYLAFAAKLGM--KDVMFVPISALDGDNVVNRS 213          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_VIBVY (Sulfate adenylyltransferase subunit 1 OS=Vibrio vulnificus (strain YJ016) GN=cysN PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 71/215 (33.02%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D + I  +E ++A ++  S +          A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ ++  LG+K  +   NKMD    ++S+ R++EI  E  ++ K +    + +  +P S  EGDN++E S  +
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DSKQI--YEDQLAAVHSDSQRVGTTGSRPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLD-------QTRRHSFISNLLGLKHFVVAVNKMDLV--EFSQQRFEEIKAEYLAFSKNLRGETD-IQIIPISALEGDNVVELSQQM 219          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ESCF3 (Sulfate adenylyltransferase subunit 1 OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=cysN PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 71/215 (33.02%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K +I   NKMD     YS+  +  I ++  ++ +++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLIVAINKMDLV--DYSEETFTRIREDYLTFAEQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_TROWT (Elongation factor Tu OS=Tropheryma whipplei (strain Twist) GN=tuf PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 77/201 (38.31%), Postives = 102/201 (50.75%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTSG---FEGD 680
            + K H+NI  IGHVD GK+T T              I R   E    N    +    +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D      S     E+V+ EV   L   G++ E VP V  SG    EGD
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA------------AISRVLSERLPSNTNVKQDFDAIDSAPEERQRGITINISHIEYETEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGAM-------AQTREHVLLAKQVGVPYLLVALNKADMV----SDEEILELVELEVRELLSNHGFDGENVPVVRVSGLKALEGD 185          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_FRATW (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=cysN PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 76/216 (35.19%), Postives = 111/216 (51.39%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPTSGFEGDNMIERSTNL 707
            ++K  +  +  G VD GKST  G L++     D ++I  FE ++A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVP S  +GDN++ +S  +
Sbjct:   20 QQKELLRFITCGSVDDGKSTLMGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHSFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSPKM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECOSE (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain SE11) GN=cysN PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 70/215 (32.56%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I K+  ++ +++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIRKDYLTFAEQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECO24 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 70/215 (32.56%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I K+  ++ +++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIRKDYLTFAEQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_VIBCM8.000e-2534.43Sulfate adenylyltransferase subunit 1 OS=Vibrio ch... [more]
CYSN_VIBCH8.000e-2534.43Sulfate adenylyltransferase subunit 1 OS=Vibrio ch... [more]
CYSN_VIBC38.000e-2534.43Sulfate adenylyltransferase subunit 1 OS=Vibrio ch... [more]
CYSN_CELJU1.045e-2433.17Sulfate adenylyltransferase subunit 1 OS=Cellvibri... [more]
CYSN_VIBVY1.365e-2433.02Sulfate adenylyltransferase subunit 1 OS=Vibrio vu... [more]
CYSN_ESCF31.365e-2433.02Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
EFTU_TROWT1.782e-2438.31Elongation factor Tu OS=Tropheryma whipplei (strai... [more]
CYSN_FRATW1.782e-2435.19Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
CYSN_ECOSE1.782e-2432.56Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO241.782e-2432.56Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
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