FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9339 contig Ccv1_Contig9339:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_TROW8 (Elongation factor Tu OS=Tropheryma whipplei (strain TW08/27) GN=tuf PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 77/201 (38.31%), Postives = 102/201 (50.75%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTSG---FEGD 680
            + K H+NI  IGHVD GK+T T              I R   E    N    +    +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D      S     E+V+ EV   L   G++ E VP V  SG    EGD
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA------------AISRVLSERLPSNTNVKQDFDAIDSAPEERQRGITINISHIEYETEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGAM-------AQTREHVLLAKQVGVPYLLVALNKADMV----SDEEILELVELEVRELLSTHGFDGENVPVVRVSGLKALEGD 185          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ERWT9 (Sulfate adenylyltransferase subunit 1 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=cysN PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 70/215 (32.56%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+A +++I ++   +  ++  N + + FVP S  EG+N+   S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSQATFEQIKQDYLDFATQLPGNLD-IRFVPLSALEGENVAAPSGHM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ALTMD (Sulfate adenylyltransferase subunit 1 OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=cysN PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 71/212 (33.49%), Postives = 116/212 (54.72%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            ++K  +  +  G VD GKST  G L++     D ++I  +E ++A + K S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM+TG S  D A++++D+  GG +       QT+ H+ L   LG+K +I   NKMD     YS+  Y +I ++   + +++  +   + FVP S  EGDN++ +S
Sbjct:   20 EKKDMLRFLTCGSVDDGKSTLIGRLLH-----DSKMI--YEDQLAAITKDSKKVGTTGEKVDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMVTGASTCDLAIILVDA-RGGVKV------QTKRHSFLVSLLGIKHVIVAINKMDLM--DYSEEVYKQIQEDYLKFAEQL--DIPDIQFVPISALEGDNVVGKS 213          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_ARTS2 (Elongation factor Tu OS=Arthrobacter sp. (strain FB24) GN=tuf PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 73/200 (36.50%), Postives = 103/200 (51.50%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSG---FEGD 680
            + K H+NI  IGHVD GK+T T  +   L          ++K      KR F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L   G++ ++ P V  SG    EGD
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISKVL----------YDKYPTLNEKRDFAS---IDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKADMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGD 184          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_PHOLL (Sulfate adenylyltransferase subunit 1 OS=Photorhabdus luminescens subsp. laumondii GN=cysN PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 67/208 (32.21%), Postives = 112/208 (53.85%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            +EK  +  +  G VD GKST  G L++    I +  +   + +   +  +  K   A ++D L AERE+GITID+A   F T K    + D PGH  + +NM TG S  D ++L+ID+  G  E       QTR H+ ++  LG++ ++   NKMD    +Y +  +++I ++  ++  ++  N + V FVP S  +GDN++  S N+
Sbjct:   28 QEKGLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSTLQNDSKRIGTQGEKLDLALLVDGLAAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLSILLIDARKGVQE-------QTRRHSFISTLLGIRHLVVAVNKMDLM--EYRQEVFNQIKQDYMNFAGQLPTNLD-VHFVPISALDGDNIVTISRNM 225          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_LARHH (Sulfate adenylyltransferase subunit 1 OS=Laribacter hongkongensis (strain HLHK9) GN=cysN PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 3
Query:   81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            A  + K  +  +  G VD GKST  G L++     D R+I  FE ++A + + S K+         A ++D L+AERE+GITID+A   F T      + D PGH  + +NM TG S AD A+++ID+  G          QTR H+ +A  LG++ +I   NKMD    ++ +A ++ I ++  ++ K +  +   + FVP S   GDN++  S  +
Sbjct:   17 ARHETKDLLRFITCGSVDDGKSTLIGRLLH-----DSRLI--FEDQLAAIERDSQKHNTTDEAVDLALLVDGLQAEREQGITIDVAYRYFSTDTRKFIIADCPGHEQYTRNMATGASTADLAIILIDARYG-------VQTQTRRHSFIASLLGIRHVIVAVNKMDLL--EFDQAVFERIRQDYLTFAKALDIH--DIRFVPLSALRGDNVVSPSERM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_FRATT (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. tularensis GN=cysN PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 76/216 (35.19%), Postives = 110/216 (50.93%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPTSGFEGDNMIERSTNL 707
            ++K  +  +  G VD GKST  G L++     D ++I  FE ++A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H  +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVP S  +GDN++ +S  +
Sbjct:   20 QQKELLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHNFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSPKM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_FRAT1 (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=cysN PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 76/216 (35.19%), Postives = 110/216 (50.93%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPTSGFEGDNMIERSTNL 707
            ++K  +  +  G VD GKST  G L++     D ++I  FE ++A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H  +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVP S  +GDN++ +S  +
Sbjct:   20 QQKELLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHNFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSPKM 216          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ARCB4 (Sulfate adenylyltransferase subunit 1 OS=Arcobacter butzleri (strain RM4018) GN=cysN PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 68/212 (32.08%), Postives = 112/212 (52.83%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRS---------FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K  +  +  G VD GKST  G L++     D ++I  FE ++A + K S         F  A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S AD A+++ID+  G          QTR H+ +   LG+K ++   NKMD     + +  +++I  +   + +++G   + +  +P S   GDN+++RS
Sbjct:   20 ENKQLLRFITCGSVDDGKSTLIGRLLH-----DSKMI--FEDQLAAIKKDSKKVGTTEGEFDLALLVDGLQSEREQGITIDVAYRYFTTDKRKFIIADTPGHEQYTRNMATGASTADLAIILIDARYG-------VQTQTRRHSFITKLLGIKHIVVAVNKMDLV--DFKEDIFNQISSDYLKFAQELGMTKD-ITLIPISALNGDNIVKRS 214          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_ARTCA (Elongation factor Tu OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=tuf PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 74/201 (36.82%), Postives = 107/201 (53.23%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMN-KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSG---FEGD 680
            + K H+NI  IGHVD GK+T T         I K + +++     ++N KR F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L   G++ ++ P V  SG    EGD
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLYDKYP----DLNEKRDFAS---IDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGD 184          
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_TROW82.328e-2438.31Elongation factor Tu OS=Tropheryma whipplei (strai... [more]
CYSN_ERWT92.328e-2432.56Sulfate adenylyltransferase subunit 1 OS=Erwinia t... [more]
CYSN_ALTMD2.328e-2433.49Sulfate adenylyltransferase subunit 1 OS=Alteromon... [more]
EFTU_ARTS23.970e-2436.50Elongation factor Tu OS=Arthrobacter sp. (strain F... [more]
CYSN_PHOLL3.970e-2432.21Sulfate adenylyltransferase subunit 1 OS=Photorhab... [more]
CYSN_LARHH3.970e-2433.03Sulfate adenylyltransferase subunit 1 OS=Laribacte... [more]
CYSN_FRATT3.970e-2435.19Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
CYSN_FRAT13.970e-2435.19Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
CYSN_ARCB43.970e-2432.08Sulfate adenylyltransferase subunit 1 OS=Arcobacte... [more]
EFTU_ARTCA5.186e-2436.82Elongation factor Tu OS=Arthrobacter chlorophenoli... [more]

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Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
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